RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 FXNQ16595 210 aa20.06■□□□□ 0.8
SHMT1-203ENST00000354098 ZSWIM7Q19AV6 140 aa20.06■□□□□ 0.8
SHMT1-203ENST00000354098 CYBRD1Q53TN4 286 aa20.06■□□□□ 0.8
SHMT1-203ENST00000354098 ARHGAP11AQ6P4F7 1023 aa20.06■□□□□ 0.8
SHMT1-203ENST00000354098 DTNBP1Q96EV8 351 aa20.06■□□□□ 0.8
SHMT1-203ENST00000354098 PRPF19Q9UMS4 504 aaKnown RBP20.06■□□□□ 0.8
SHMT1-203ENST00000354098 SVILO95425 2214 aa20.06■□□□□ 0.8
SHMT1-203ENST00000354098 OR2M5A3KFT3 312 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 EBAG9O00559 213 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 LGI1O95970 557 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 FESP07332 822 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 PRKCAP17252 672 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 BMP7P18075 431 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 IDH2P48735 452 aaKnown RBP20.05■□□□□ 0.8
SHMT1-203ENST00000354098 FOXF1Q12946 379 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 ELOAQ14241 798 aaKnown RBP20.05■□□□□ 0.8
SHMT1-203ENST00000354098 SPATS1Q496A3 300 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 GLYR1Q49A26 553 aaPredicted RBP20.05■□□□□ 0.8
SHMT1-203ENST00000354098 DCST1Q5T197 706 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 ZNF605Q86T29 641 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 ZNF440Q8IYI8 595 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 ARHGAP24Q8N264 748 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 BHLHE22Q8NFJ8 381 aaPredicted RBP20.05■□□□□ 0.8
SHMT1-203ENST00000354098 ZNF563Q8TA94 476 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 FAM162AQ96A26 154 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 ZBTB8AQ96BR9 441 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 RNF145Q96MT1 663 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 SFXN2Q96NB2 322 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 PRR14Q9BWN1 585 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 ZNF337Q9Y3M9 751 aa20.05■□□□□ 0.8
SHMT1-203ENST00000354098 FAM47E-STBD1D6RA91 191 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 NPIPA2E9PIF3 369 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 NPIPA3F8WFD2 350 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 PYCARD-AS1I3L0S3 204 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 M0R3H8 397 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 AQP7O14520 342 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 ATP5HO75947 161 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 SERPINA1P01009 418 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 TNFRSF1BP20333 461 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 PSMA4P25789 261 aaKnown RBP20.04■□□□□ 0.8
SHMT1-203ENST00000354098 SLC6A8P48029 635 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 STARP49675 285 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 ZNF136P52737 540 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 SESN3P58005 492 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 DNAL1Q4LDG9 190 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 VASNQ6EMK4 673 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 ZNF550Q7Z398 422 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 LACC1Q8IV20 430 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 OR4D11Q8NGI4 311 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 UGT2B28Q9BY64 529 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 SLC13A4Q9UKG4 626 aa20.04■□□□□ 0.8
SHMT1-203ENST00000354098 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 IFNA14P01570 189 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 IL11P20809 199 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 PTGS2P35354 604 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 CRYZQ08257 329 aaKnown RBP20.03■□□□□ 0.8
SHMT1-203ENST00000354098 RBM45Q8IUH3 476 aaKnown RBP20.03■□□□□ 0.8
SHMT1-203ENST00000354098 GTPBP8Q8N3Z3 284 aaPredicted RBP20.03■□□□□ 0.8
SHMT1-203ENST00000354098 RASSF5Q8WWW0 418 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 ABTB1Q969K4 478 aaPredicted RBP20.03■□□□□ 0.8
SHMT1-203ENST00000354098 TPD52L3Q96J77 140 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 TIMP4Q99727 224 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 PIGQQ9BRB3 760 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 CADM1Q9BY67 442 aaKnown RBP20.03■□□□□ 0.8
SHMT1-203ENST00000354098 KLHL28Q9NXS3 571 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 MED12Q93074 2177 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 SYT5O00445 386 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 ARPC2O15144 300 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 GSC2O15499 205 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 EFNA2O43921 213 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 TPST2O60704 377 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 DNAJC8O75937 253 aaPredicted RBP20.03■□□□□ 0.8
SHMT1-203ENST00000354098 C8BP07358 591 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 ME2P23368 584 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 UQCRFS1P47985 274 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 NCALDP61601 193 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 SELENOWP63302 87 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 NHSL2Q5HYW2 709 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 CCDC121Q6ZUS5 278 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 GALNT11Q8NCW6 608 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 SLC35B4Q969S0 331 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 ARHGDIGQ99819 225 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 SH3GLB1Q9Y371 365 aa20.03■□□□□ 0.8
SHMT1-203ENST00000354098 C7orf72A4D263 438 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 H3BML4 177 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 ETV2O00321 342 aaPredicted RBP20.02■□□□□ 0.8
SHMT1-203ENST00000354098 FAAHO00519 579 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 NTN1O95631 604 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 ZNF682O95780 498 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 GNLYP22749 145 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 CHMP24386 653 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 RASSF2P50749 326 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 RGS8P57771 180 aaPredicted RBP20.02■□□□□ 0.8
SHMT1-203ENST00000354098 MS4A2Q01362 244 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 NPTX1Q15818 432 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 C3AR1Q16581 482 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 NRF1Q16656 503 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 SLC25A53Q5H9E4 307 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 AAGABQ6PD74 315 aa20.02■□□□□ 0.8
SHMT1-203ENST00000354098 CBLL1Q75N03 491 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms