RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 FAM53BQ14153 422 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 SEC23BQ15437 767 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 TBCEQ15813 527 aaPredicted RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 NPTX1Q15818 432 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 PRICKLE4Q2TBC4 344 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 ZNF311Q5JNZ3 666 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 FGD3Q5JSP0 725 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 TCTE1Q5JU00 501 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 TMEM201Q5SNT2 666 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 SYT6Q5T7P8 510 aaPredicted RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 SLX4IPQ5VYV7 408 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 C12orf73Q69YU5 71 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 ZNF324BQ6AW86 544 aaPredicted RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 TYW3Q6IPR3 259 aaKnown RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 PGBD2Q6P3X8 592 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 WDR74Q6RFH5 385 aaPredicted RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 RPTNQ6XPR3 784 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 MCATQ8IVS2 390 aaKnown RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 ZNF595Q8IYB9 648 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 MORN4Q8NDC4 146 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 TMEM52Q8NDY8 209 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 WFDC11Q8NEX6 87 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 VANGL1Q8TAA9 524 aaPredicted RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 SLC7A13Q8TCU3 470 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 DIO2Q92813 273 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 CDS1Q92903 461 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 NINJ1Q92982 152 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 MYDGFQ969H8 173 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 ANKRD9Q96BM1 317 aaPredicted RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 SLC35A4Q96G79 324 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 YIPF4Q9BSR8 244 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 FNDC11Q9BVV2 318 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 ZNF350Q9GZX5 532 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 LHPPQ9H008 270 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 KLHL25Q9H0H3 589 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 LIME1Q9H400 295 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 MTHFD2LQ9H903 347 aaPredicted RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 CACYBPQ9HB71 228 aaKnown RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 FAM60AQ9NP50 221 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 EQTNQ9NQ60 294 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 MAN2C1Q9NTJ4 1040 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 KLHL28Q9NXS3 571 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 MAT2BQ9NZL9 334 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 CNOT2Q9NZN8 540 aaKnown RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 REV1Q9UBZ9 1251 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 PSORS1C1Q9UIG5 152 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 SLC13A4Q9UKG4 626 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 CDC14AQ9UNH5 594 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 PLCL2Q9UPR0 1127 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 MRPS33Q9Y291 106 aaKnown RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 ZNF443Q9Y2A4 671 aaPredicted RBP7.56□□□□□ -1.2
CD44-205ENST00000352818 NBEAL2Q6ZNJ1 2754 aa7.56□□□□□ -1.2
CD44-205ENST00000352818 FER1L5A0AVI2 2057 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 AGAP5A6NIR3 686 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 SLC9B1P1A6NJY1 282 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 TTC36A6NLP5 189 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 CLCA1A8K7I4 914 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 RNF212BA8MTL3 300 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 ZNF749O43361 778 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 CHST10O43529 356 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 OR10H3O60404 316 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 FMO6PO60774 539 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 DNAJB6O75190 326 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 RDH16O75452 317 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 NKX2-2O95096 273 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 GABARAPO95166 117 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 OR5F1O95221 314 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 MT-ND2P03891 347 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 INHBBP09529 407 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 ALOX5P09917 674 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 PIPP12273 146 aaPredicted RBP7.55□□□□□ -1.2
CD44-205ENST00000352818 TYRP1P17643 537 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 GSTM3P21266 225 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 FUT4P22083 530 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 IFNA8P32881 189 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 PTGER1P34995 402 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 IFNGR2P38484 337 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 MASP1P48740 699 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 GP2P55259 537 aaKnown RBP7.55□□□□□ -1.2
CD44-205ENST00000352818 OLR1P78380 273 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 EMX1Q04741 257 aaPredicted RBP7.55□□□□□ -1.2
CD44-205ENST00000352818 ST3GAL3Q11203 375 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 MAP4K2Q12851 820 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 BIKQ13323 160 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 LARS2Q15031 903 aaKnown RBP7.55□□□□□ -1.2
CD44-205ENST00000352818 PTGES3Q15185 160 aaKnown RBP7.55□□□□□ -1.2
CD44-205ENST00000352818 DUSP5Q16690 384 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 ENTPD8Q5MY95 495 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 SLC25A30Q5SVS4 291 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 UBE2UQ5VVX9 321 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 GPR107Q5VW38 600 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 C1orf94Q6P1W5 598 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 PODNL1Q6PEZ8 512 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 XKRXQ6PP77 449 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 MEX3BQ6ZN04 569 aaKnown RBP7.55□□□□□ -1.2
CD44-205ENST00000352818 ANKRD13BQ86YJ7 626 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 RBM45Q8IUH3 476 aaKnown RBP7.55□□□□□ -1.2
CD44-205ENST00000352818 CCDC103Q8IW40 242 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 PEX5LQ8IYB4 626 aa7.55□□□□□ -1.2
CD44-205ENST00000352818 ZNF619Q8N2I2 560 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms