RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 FADS2O95864 444 aaKnown RBP8.52□□□□□ -1.05
ATG4A-202ENST00000345734 AK1P00568 194 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 DCKP27707 260 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 HTR2AP28223 471 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 GP2P55259 537 aaKnown RBP8.52□□□□□ -1.05
ATG4A-202ENST00000345734 MVKQ03426 396 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 ST3GAL3Q11203 375 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 NR0B2Q15466 257 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 FLYWCH1Q4VC44 716 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 EIPR1Q53HC9 387 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 TUBA3EQ6PEY2 450 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF730Q6ZMV8 503 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 PTCHD4Q6ZW05 846 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 KIF18BQ86Y91 864 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF321PQ8N8H1 164 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 RCBTB1Q8NDN9 531 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 TOR1AIP2Q8NFQ8 470 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 OR4C6Q8NH72 309 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 C16orf52Q8NHV5 167 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 GGHQ92820 318 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 SLC38A4Q969I6 547 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 SLC41A3Q96GZ6 507 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 IL4I1Q96RQ9 567 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 CTRCQ99895 268 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 OR10A5Q9H207 317 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF768Q9H5H4 540 aaKnown RBP8.52□□□□□ -1.05
ATG4A-202ENST00000345734 GAREM1Q9H706 876 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 ENAMQ9NRM1 1142 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 PNO1Q9NRX1 252 aaKnown RBP8.52□□□□□ -1.05
ATG4A-202ENST00000345734 SELENONQ9NZV5 590 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 CNIH4Q9P003 139 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 PSORS1C1Q9UIG5 152 aa8.52□□□□□ -1.05
ATG4A-202ENST00000345734 NOSIPQ9Y314 301 aaKnown RBP8.52□□□□□ -1.05
ATG4A-202ENST00000345734 CDHR4A6H8M9 788 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 C17orf105B2RV13 164 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 H3BMQ9 156 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 PIP5K1CO60331 668 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 PRAMEF2O60811 474 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 OR5F1O95221 314 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 CT45A8P0DMV1 189 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 CT45A9P0DMV2 189 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 ITIH1P19827 911 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 PRKACBP22694 351 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 C21orf33P30042 268 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-202ENST00000345734 TTKP33981 857 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 PCYT1AP49585 367 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 RPS3AP61247 264 aaKnown RBP8.51□□□□□ -1.05
ATG4A-202ENST00000345734 CCL7P80098 99 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 FUT7Q11130 342 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 ZNHIT3Q15649 155 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-202ENST00000345734 MINDY4Q4G0A6 757 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 CT45A2Q5DJT8 189 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 VWA2Q5GFL6 755 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 PDZK1Q5T2W1 519 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 SLX4IPQ5VYV7 408 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 CD300LDQ6UXZ3 194 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 PRSS58Q8IYP2 241 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 GPR135Q8IZ08 494 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 EID2Q8N6I1 236 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF614Q8N883 585 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF615Q8N8J6 731 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 LILRB1Q8NHL6 650 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-202ENST00000345734 TMEM255BQ8WV15 326 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 IPCEF1Q8WWN9 437 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF501Q96CX3 271 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-202ENST00000345734 FAM46AQ96IP4 442 aaKnown RBP8.51□□□□□ -1.05
ATG4A-202ENST00000345734 COG8Q96MW5 612 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 SIGLEC11Q96RL6 698 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 NDC1Q9BTX1 674 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 DUSP23Q9BVJ7 150 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 ITPAQ9BY32 194 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 PLA2G12AQ9BZM1 189 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 DSN1Q9H410 356 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 EGLN3Q9H6Z9 239 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 PALMDQ9NP74 551 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 FGF21Q9NSA1 209 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 TBC1D23Q9NUY8 699 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 GPR83Q9NYM4 423 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 SLC7A7Q9UM01 511 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 PCDHGB1Q9Y5G3 927 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 A0A1W2PQM1 296 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF99A8MXY4 864 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-202ENST00000345734 CENPBD1B2RD01 187 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 TRMUO75648 421 aaKnown RBP8.51□□□□□ -1.05
ATG4A-202ENST00000345734 OMPP47874 163 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 FOXL2P58012 376 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 SERTAD2Q14140 314 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 OR1Q1Q15612 314 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 C12orf73Q69YU5 71 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 TMEM71Q6P5X7 295 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 PRSS48Q7RTY5 328 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF227Q86WZ6 799 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 LINC00471Q8N535 108 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 PTPMT1Q8WUK0 201 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-202ENST00000345734 NR4A3Q92570 626 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 CNOT9Q92600 299 aaKnown RBP8.51□□□□□ -1.05
ATG4A-202ENST00000345734 ZNF775Q96BV0 537 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-202ENST00000345734 HSPBAP1Q96EW2 488 aa8.51□□□□□ -1.05
ATG4A-202ENST00000345734 SENP5Q96HI0 755 aaPredicted RBP8.51□□□□□ -1.05
ATG4A-202ENST00000345734 LMF1Q96S06 567 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms