RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 SOX4Q06945 474 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-202ENST00000345356 GPR17Q13304 367 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 GAB1Q13480 694 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 RBM39Q14498 530 aaKnown RBP11.37□□□□□ -0.59
COL12A1-202ENST00000345356 DUSP7Q16829 419 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 C3orf33Q6P1S2 294 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 Q6ZSR9 355 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 SH3RF2Q8TEC5 729 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 OVCA2Q8WZ82 227 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 OR52D1Q9H346 318 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 KIF25Q9UIL4 384 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 UGDHO60701 494 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 CYTIPO60759 359 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 NFATC1O95644 943 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 CCR9P51686 369 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 ACY1Q03154 408 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 ZMAT1Q5H9K5 638 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 HEPHL1Q6MZM0 1159 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 LILRB2Q8N423 598 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 OR6F1Q8NGZ6 308 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 SFXN5Q8TD22 340 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 ST6GALNAC5Q9BVH7 336 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 RNF32Q9H0A6 362 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 SDHAF3Q9NRP4 125 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 FAM212BQ9NTI7 297 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-202ENST00000345356 NDRG4Q9ULP0 352 aaKnown RBP11.37□□□□□ -0.59
COL12A1-202ENST00000345356 MANSC4A6NHS7 340 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-202ENST00000345356 FAM227AF5H4B4 570 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 KCNK5O95279 499 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 DIRAS3O95661 229 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 GABRB1P18505 474 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 ANXA7P20073 488 aaKnown RBP11.37□□□□□ -0.59
COL12A1-202ENST00000345356 GPR85P60893 370 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 PLA2G7Q13093 441 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 SLC9A3R2Q15599 337 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 RNF151Q2KHN1 245 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 RNF212Q495C1 297 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 PDZD11Q5EBL8 140 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 SOHLH1Q5JUK2 328 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 GPR155Q7Z3F1 870 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 OR56B2PQ8NGI1 322 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 OR4D6Q8NGJ1 314 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF461Q8TAF7 563 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 TMEM239Q8WW34 195 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 OCSTAMPQ9BR26 566 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 C20orf24Q9BUV8 137 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 IGFLR1Q9H665 355 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 SCPEP1Q9HB40 452 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 TESQ9UGI8 421 aaKnown RBP11.37□□□□□ -0.59
COL12A1-202ENST00000345356 A0A0U1RQS6 177 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 SLC22A23A1A5C7 686 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 SPI1P17947 270 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 TACR1P25103 407 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 NDUFS1P28331 727 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 ILKQ13418 452 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 MANEALQ5VSG8 457 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 TECPR1Q7Z6L1 1165 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 TEX19Q8NA77 164 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 OR6N1Q8NGY5 312 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 IER3IP1Q9Y5U9 82 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 DCCP43146 1447 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 BHLHE40O14503 412 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 ELK1P19419 428 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 CTHP32929 405 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 STK19P49842 368 aaPredicted RBP11.37□□□□□ -0.59
COL12A1-202ENST00000345356 FXYD4P59646 89 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 TEKQ02763 1124 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 GPR50Q13585 617 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 C9orf131Q5VYM1 1079 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 TRNP1Q6NT89 227 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF566Q969W8 418 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 INTS14Q96SY0 518 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 ASH2LQ9UBL3 628 aa11.37□□□□□ -0.59
COL12A1-202ENST00000345356 KCPQ6ZWJ8 1503 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 MAGEB4O15481 346 aaPredicted RBP11.36□□□□□ -0.59
COL12A1-202ENST00000345356 MPIG6BO95866 241 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 CTXN1P60606 82 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 NNATQ16517 81 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 FAM209AQ5JX71 171 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 RNF175Q8N4F7 328 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 ABHD4Q8TB40 342 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 PGAP3Q96FM1 320 aaPredicted RBP11.36□□□□□ -0.59
COL12A1-202ENST00000345356 USP36Q9P275 1121 aaKnown RBP11.36□□□□□ -0.59
COL12A1-202ENST00000345356 MYO10Q9HD67 2058 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 HSBP1L1C9JCN9 74 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 TRIM77I1YAP6 450 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 APODP05090 189 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 ZP3P21754 424 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 HBA1P69905 142 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 GPR139Q6DWJ6 353 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 MCEMP1Q8IX19 187 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 G6PC3Q9BUM1 346 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 ACTRT3Q9BYD9 372 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 SLC19A1P41440 591 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 ZC3H14Q6PJT7 736 aaKnown RBP11.36□□□□□ -0.59
COL12A1-202ENST00000345356 CORO6Q6QEF8 472 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 PRSS45Q7RTY3 260 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 NANOGP1Q8N7R0 232 aa11.36□□□□□ -0.59
COL12A1-202ENST00000345356 RELL2Q8NC24 303 aaPredicted RBP11.36□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF689Q96CS4 500 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms