RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 MSTNO14793 375 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 EIF4E2O60573 245 aaKnown RBP12.92□□□□□ -0.34
HMGN3-202ENST00000344726 DNAJA2O60884 412 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 SLC22A3O75751 556 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 ROS1P08922 2347 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 NID1P14543 1247 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 IDO1P14902 403 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 ELK4P28324 431 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 CCKARP32238 428 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 SFTPDP35247 375 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 CPOXP36551 454 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 EIF1P41567 113 aaKnown RBP12.92□□□□□ -0.34
HMGN3-202ENST00000344726 KHKP50053 298 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 EEF1A1P68104 462 aaKnown RBP12.92□□□□□ -0.34
HMGN3-202ENST00000344726 PLAURQ03405 335 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 FAM27E3Q08E93 113 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 COX20Q5RI15 118 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 EEF1A1P5Q5VTE0 462 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 PPP4R4Q6NUP7 873 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 EPGNQ6UW88 154 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 ESPNLQ6ZVH7 1005 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 LSRQ86X29 649 aaPredicted RBP12.92□□□□□ -0.34
HMGN3-202ENST00000344726 TMCO5AQ8N6Q1 288 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 GLB1L3Q8NCI6 653 aaPredicted RBP12.92□□□□□ -0.34
HMGN3-202ENST00000344726 OR5W2Q8NH69 310 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 OR2V1Q8NHB1 315 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 KLHL15Q96M94 604 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 C7orf26Q96N11 449 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 LAT2Q9GZY6 243 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 CXXC4Q9H2H0 198 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 PLEKHF2Q9H8W4 249 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 SDR39U1Q9NRG7 319 aaPredicted RBP12.92□□□□□ -0.34
HMGN3-202ENST00000344726 STOML1Q9UBI4 398 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 CLEC4AQ9UMR7 237 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 PLEKHA6Q9Y2H5 1048 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 WDR45Q9Y484 360 aa12.92□□□□□ -0.34
HMGN3-202ENST00000344726 GPC6Q9Y625 555 aaPredicted RBP12.92□□□□□ -0.34
HMGN3-202ENST00000344726 ETV2O00321 342 aaPredicted RBP12.91□□□□□ -0.34
HMGN3-202ENST00000344726 UBDO15205 165 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 SIAH2O43255 324 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 DIAPH2O60879 1101 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 H6PDO95479 791 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 AGR2O95994 175 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 HRGP04196 525 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 GUSBP08236 651 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 FCGR2AP12318 317 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 H2AFXP16104 143 aaPredicted RBP12.91□□□□□ -0.34
HMGN3-202ENST00000344726 ME2P23368 584 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 ADH6P28332 368 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 PGM1P36871 562 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 CCR4P51679 360 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 MVDP53602 400 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 CHRNEQ04844 493 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 FGFBP1Q14512 234 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 QPRTQ15274 297 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 POU4F3Q15319 338 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 SYPL1Q16563 259 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 GSTA3Q16772 222 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 SLC25A53Q5H9E4 307 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 ATAD3BQ5T9A4 648 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 HBMQ6B0K9 141 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 DNAJC14Q6Y2X3 702 aaPredicted RBP12.91□□□□□ -0.34
HMGN3-202ENST00000344726 ZNF621Q6ZSS3 439 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 C22orf34Q6ZV56 151 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 ZNF619Q8N2I2 560 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 ANKFN1Q8N957 763 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 FAM71CQ8NEG0 241 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 PNPT1Q8TCS8 783 aaKnown RBP12.91□□□□□ -0.34
HMGN3-202ENST00000344726 OSTF1Q92882 214 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 NINJ1Q92982 152 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 ZBTB18Q99592 522 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 THUMPD3Q9BV44 507 aaKnown RBP12.91□□□□□ -0.34
HMGN3-202ENST00000344726 SRXN1Q9BYN0 137 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 QRSL1Q9H0R6 528 aaKnown RBP12.91□□□□□ -0.34
HMGN3-202ENST00000344726 COQ10BQ9H8M1 238 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 ZIM2Q9NZV7 527 aa12.91□□□□□ -0.34
HMGN3-202ENST00000344726 ZFHX3Q15911 3703 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 MTORP42345 2549 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 SH3D21A4FU49 640 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 CLDN24A6NM45 220 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 ADAM11O75078 769 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 CYP7B1O75881 506 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 CSTAP01040 98 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 IL6P05231 212 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 CHRM4P08173 479 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 UBTFL6P0CB48 400 aaPredicted RBP12.9□□□□□ -0.34
HMGN3-202ENST00000344726 CD8BP10966 210 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 CBFBQ13951 182 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 MAPK11Q15759 364 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 TMEM176BQ3YBM2 270 aaPredicted RBP12.9□□□□□ -0.34
HMGN3-202ENST00000344726 GTDC1Q4AE62 458 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 GPAT3Q53EU6 434 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 PAMR1Q6UXH9 720 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 FAM214BQ7L5A3 538 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 TRIML2Q8N7C3 387 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 ZNF610Q8N9Z0 462 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 ATP6V1C2Q8NEY4 427 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 TOR1AIP2Q8NFQ8 470 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 LRRC8CQ8TDW0 803 aa12.9□□□□□ -0.34
HMGN3-202ENST00000344726 ZFP90Q8TF47 636 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms