RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 PGM1P36871 562 aa16.23■□□□□ 0.19
USF2-202ENST00000343550 SUCLG1P53597 346 aaKnown RBP16.23■□□□□ 0.19
USF2-202ENST00000343550 IST1P53990 364 aa16.23■□□□□ 0.19
USF2-202ENST00000343550 SEC24CP53992 1094 aa16.23■□□□□ 0.19
USF2-202ENST00000343550 GYS2P54840 703 aa16.23■□□□□ 0.19
USF2-202ENST00000343550 SUMO3P55854 103 aaPredicted RBP16.23■□□□□ 0.19
USF2-202ENST00000343550 KCNJ10P78508 379 aa16.23■□□□□ 0.19
USF2-202ENST00000343550 FADDQ13158 208 aa16.23■□□□□ 0.19
USF2-202ENST00000343550 TOMM34Q15785 309 aaPredicted RBP16.23■□□□□ 0.19
USF2-202ENST00000343550 ADGRE4PQ86SQ3 457 aa16.23■□□□□ 0.19
USF2-202ENST00000343550 OR5W2Q8NH69 310 aa16.23■□□□□ 0.19
USF2-202ENST00000343550 POC1BQ8TC44 478 aa16.23■□□□□ 0.19
USF2-202ENST00000343550 ZNF524Q96C55 264 aa16.23■□□□□ 0.19
USF2-202ENST00000343550 ARSGQ96EG1 525 aa16.23■□□□□ 0.19
USF2-202ENST00000343550 LRRC46Q96FV0 321 aa16.23■□□□□ 0.19
USF2-202ENST00000343550 TRIB1Q96RU8 372 aa16.23■□□□□ 0.19
USF2-202ENST00000343550 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.23■□□□□ 0.19
USF2-202ENST00000343550 CRIM1Q9NZV1 1036 aa16.23■□□□□ 0.19
USF2-202ENST00000343550 ZNF629Q9UEG4 869 aaPredicted RBP16.23■□□□□ 0.19
USF2-202ENST00000343550 AP4B1Q9Y6B7 739 aa16.23■□□□□ 0.19
USF2-202ENST00000343550 ARHGAP21Q5T5U3 1957 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 H0Y3Z8 333 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 H3BML4 177 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 ANGPT2O15123 496 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 DNAJA2O60884 412 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 NUDT14O95848 222 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 IL2RAP01589 272 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 ZNF17P17021 662 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 GPX2P18283 190 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 PPIBP23284 216 aaKnown RBP16.22■□□□□ 0.19
USF2-202ENST00000343550 ASCL1P50553 236 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 KLF10Q13118 480 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 SKP2Q13309 424 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 RUNDC3AQ59EK9 446 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 POMZP3Q6PJE2 187 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 C10orf111Q8N326 155 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 RNASE6Q93091 150 aaKnown RBP16.22■□□□□ 0.19
USF2-202ENST00000343550 UCN2Q96RP3 112 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 IKZF5Q9H5V7 419 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 CALML5Q9NZT1 146 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 SLC35A3Q9Y2D2 325 aa16.22■□□□□ 0.19
USF2-202ENST00000343550 CLDN24A6NM45 220 aa16.21■□□□□ 0.19
USF2-202ENST00000343550 H0YC42 278 aa16.21■□□□□ 0.19
USF2-202ENST00000343550 FBP2O00757 339 aa16.21■□□□□ 0.19
USF2-202ENST00000343550 BCAS1O75363 584 aaPredicted RBP16.21■□□□□ 0.19
USF2-202ENST00000343550 CYP7B1O75881 506 aa16.21■□□□□ 0.19
USF2-202ENST00000343550 BCHEP06276 602 aa16.21■□□□□ 0.19
USF2-202ENST00000343550 UBTFL6P0CB48 400 aaPredicted RBP16.21■□□□□ 0.19
USF2-202ENST00000343550 RPS4Y1P22090 263 aaKnown RBP16.21■□□□□ 0.19
USF2-202ENST00000343550 ADSLP30566 484 aaPredicted RBP16.21■□□□□ 0.19
USF2-202ENST00000343550 EIF1P41567 113 aaKnown RBP16.21■□□□□ 0.19
USF2-202ENST00000343550 CRISP3P54108 245 aa16.21■□□□□ 0.19
USF2-202ENST00000343550 TPD52P55327 224 aaPredicted RBP16.21■□□□□ 0.19
USF2-202ENST00000343550 CLDN20P56880 219 aa16.21■□□□□ 0.19
USF2-202ENST00000343550 FBXL19-AS1Q494R0 122 aa16.21■□□□□ 0.19
USF2-202ENST00000343550 UBQLNLQ8IYU4 475 aa16.21■□□□□ 0.19
USF2-202ENST00000343550 FAM71CQ8NEG0 241 aa16.21■□□□□ 0.19
USF2-202ENST00000343550 TOR1AIP2Q8NFQ8 470 aa16.21■□□□□ 0.19
USF2-202ENST00000343550 RNF145Q96MT1 663 aa16.21■□□□□ 0.19
USF2-202ENST00000343550 GPATCH1Q9BRR8 931 aaKnown RBP16.21■□□□□ 0.19
USF2-202ENST00000343550 THUMPD3Q9BV44 507 aaKnown RBP16.21■□□□□ 0.19
USF2-202ENST00000343550 CLEC4MQ9H2X3 399 aaPredicted RBP16.21■□□□□ 0.19
USF2-202ENST00000343550 RASSF1Q9NS23 344 aa16.21■□□□□ 0.19
USF2-202ENST00000343550 HEATR5AQ86XA9 2040 aa16.21■□□□□ 0.19
USF2-202ENST00000343550 A0A0G2JPF8 293 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 FAM221AA4D161 298 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 MBD3L4A6NDZ8 208 aaPredicted RBP16.2■□□□□ 0.18
USF2-202ENST00000343550 MBD3L3A6NE82 208 aaPredicted RBP16.2■□□□□ 0.18
USF2-202ENST00000343550 TMEM247A6NEH6 219 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 MBD3L5A6NJ08 208 aaPredicted RBP16.2■□□□□ 0.18
USF2-202ENST00000343550 CLCA1A8K7I4 914 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 EVPLLA8MZ36 301 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 HNRNPCL2B2RXH8 293 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 HNRNPCL3B7ZW38 293 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 EFNA2O43921 213 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 HNRNPCL1O60812 293 aaKnown RBP16.2■□□□□ 0.18
USF2-202ENST00000343550 HNRNPCL4P0DMR1 293 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 IL7RP16871 459 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 ADH6P28332 368 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 LSP1P33241 339 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 ZNF136P52737 540 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 RAC1P63000 192 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 PLAURQ03405 335 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 CBFBQ13951 182 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 GNA13Q14344 377 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 MEIOBQ8N635 442 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 MBD3L2Q8NHZ7 208 aaPredicted RBP16.2■□□□□ 0.18
USF2-202ENST00000343550 FBXO27Q8NI29 283 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 NINJ1Q92982 152 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 MAL2Q969L2 176 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 TMEM19Q96HH6 336 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 ELAC2Q9BQ52 826 aaKnown RBP16.2■□□□□ 0.18
USF2-202ENST00000343550 KIAA1549Q9HCM3 1950 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 A4GALTQ9NPC4 353 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 DSPPQ9NZW4 1301 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 STOML1Q9UBI4 398 aa16.2■□□□□ 0.18
USF2-202ENST00000343550 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.2■□□□□ 0.18
USF2-202ENST00000343550 FOXD3Q9UJU5 478 aaPredicted RBP16.2■□□□□ 0.18
USF2-202ENST00000343550 GPC6Q9Y625 555 aaPredicted RBP16.2■□□□□ 0.18
USF2-202ENST00000343550 DBIP07108 87 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms