RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 POU2F3Q9UKI9 436 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ELOA3CA0A087WX78 387 aaPredicted RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 LACTBL1A8MY62 500 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 AQP7O14520 342 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ADAM11O75078 769 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 PMS2P2O95744 297 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 SCGB1A1P11684 91 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 HSD17B1P14061 328 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 CSNK2A2P19784 350 aaPredicted RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 ANXA7P20073 488 aaKnown RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 CRHBPP24387 322 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 BSGP35613 385 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 PTGIRP43119 386 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 MELKQ14680 651 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 LINGO4Q6UY18 593 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ADGRG3Q86Y34 549 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 CPNE4Q96A23 557 aaPredicted RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 SYNPO2LQ9H987 977 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 FKBPLQ9UIM3 349 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 KIAA1549LQ6ZVL6 1849 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 A0A0A6YYJ9 748 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 PRSS51A0A1B0GVH4 220 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 LRRC72A6NJI9 287 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 UNCXA6NJT0 531 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 CD300LBA8K4G0 201 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ASGR1P07306 291 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 QDPRP09417 244 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ERVFRD-1P60508 538 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 BTG1P62324 171 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ASAH1Q13510 395 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 FAM209BQ5JX69 171 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 C18orf63Q68DL7 685 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 TXNRD3Q86VQ6 643 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 SIDT2Q8NBJ9 832 aaKnown RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 IMP4Q96G21 291 aaKnown RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 TRMT2BQ96GJ1 504 aaKnown RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 SMIM3Q9BZL3 60 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 SDHAF3Q9NRP4 125 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 SEMA4GQ9NTN9 838 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 OSER1Q9NX31 292 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ZDHHC7Q9NXF8 308 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 CNOT2Q9NZN8 540 aaKnown RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 NDRG2Q9UN36 371 aaKnown RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 TMEM221A6NGB7 291 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 SLC15A5A6NIM6 579 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 IQCF5A8MTL0 148 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 H0YIV9 168 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 EFNA1P20827 205 aaPredicted RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 C5AR1P21730 350 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 EPHA5P54756 1037 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 HNRNPDQ14103 355 aaKnown RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 HES1Q14469 280 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 LYPD4Q6UWN0 246 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 FA2HQ7L5A8 372 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 OR6V1Q8N148 313 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ZNF738Q8NE65 137 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ZNF680Q8NEM1 530 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 SUSD6Q92537 303 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 SPTSSAQ969W0 71 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 MAP6Q96JE9 813 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 TMEM74Q96NL1 305 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ISYNA1Q9NPH2 558 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ZDHHC18Q9NUE0 388 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 C2orf42Q9NWW7 574 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 SPATA31D1Q6ZQQ2 1576 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 SAP18O00422 153 aaKnown RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 SIGLEC6O43699 453 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 VTNP04004 478 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 CNTN2Q02246 1040 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 FOXO1Q12778 655 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 CDC20Q12834 499 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 DALRD3Q5D0E6 543 aaKnown RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 SLC27A1Q6PCB7 646 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 ZNF704Q6ZNC4 412 aaPredicted RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 CATSPERGQ6ZRH7 1159 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 OR6F1Q8NGZ6 308 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 RAET1EQ8TD07 263 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 TSLPQ969D9 159 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 TTTY10Q9BZA0 68 aa5.83□□□□□ -1.48
VCAN-203ENST00000343200 GBA2Q9HCG7 927 aaPredicted RBP5.83□□□□□ -1.48
VCAN-203ENST00000343200 ANKRD28O15084 1053 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 ITGB2P05107 769 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 SERPINA5P05154 406 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 PFKLP17858 780 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 OAZ1P54368 228 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 TCTAP57738 103 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 FXYD4P59646 89 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 BCL7AQ4VC05 210 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 FAM74A1Q5RGS3 127 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 VASNQ6EMK4 673 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 TRAPPC6BQ86SZ2 158 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 TCTEX1D1Q8N7M0 179 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 LMNTD1Q8N9Z9 388 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 JOSD2Q8TAC2 188 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 LNX1Q8TBB1 728 aaPredicted RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 POLDIP3Q9BY77 421 aaKnown RBP5.82□□□□□ -1.48
VCAN-203ENST00000343200 DERL2Q9GZP9 239 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 SLC17A6Q9P2U8 582 aa5.82□□□□□ -1.48
VCAN-203ENST00000343200 VSTM5A8MXK1 200 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms