RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 ULK3Q6PHR2 472 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 APOOLQ6UXV4 268 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 SLC29A4Q7RTT9 530 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 OVCH1Q7RTY7 1134 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 ANKRD37Q7Z713 158 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 FAM71CQ8NEG0 241 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 FANK1Q8TC84 345 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 OIT3Q8WWZ8 545 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 ATOH1Q92858 354 aaPredicted RBP18.37■□□□□ 0.53
RTN1-202ENST00000342503 TMEM80Q96HE8 168 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 ZNF426Q9BUY5 554 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 OR52D1Q9H346 318 aa18.37■□□□□ 0.53
RTN1-202ENST00000342503 IDSB3KWA1 339 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 TO15178 435 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 OIP5O43482 229 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 CNOT3O75175 753 aaKnown RBP18.36■□□□□ 0.53
RTN1-202ENST00000342503 GABARAPO95166 117 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 ONECUT2O95948 504 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 TBXA2RP21731 343 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 CSTF2P33240 577 aaKnown RBP eCLIP18.36■□□□□ 0.53
RTN1-202ENST00000342503 MPLP40238 635 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 FXYD6P3P58550 94 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 ANGPT1Q15389 498 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 DESI1Q6ICB0 168 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 HSDL2Q6YN16 418 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 BMP8AQ7Z5Y6 402 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 P2RY8Q86VZ1 359 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 ZNF440Q8IYI8 595 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 CYP4Z2PQ8N1L4 340 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 OR2T33Q8NG76 320 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 OR13C2Q8NGS9 318 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 PHOSPHO1Q8TCT1 267 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 TEX12Q9BXU0 123 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 SLC24A3Q9HC58 644 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 HHATLQ9HCP6 504 aa18.36■□□□□ 0.53
RTN1-202ENST00000342503 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.35■□□□□ 0.53
RTN1-202ENST00000342503 EFCAB9A8MZ26 197 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 ALOX12BO75342 701 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 NGFRP08138 427 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 UBL4AP11441 157 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 FGF5P12034 268 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 CD36P16671 472 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 IL12BP29460 328 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 LIPAP38571 399 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 GPR143P51810 404 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 SPCS2Q15005 226 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 LCN10Q6JVE6 187 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 ZNF441Q8N8Z8 693 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 BCL7BQ9BQE9 202 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 MESP1Q9BRJ9 268 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 UBQLN3Q9H347 655 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 VSTM2BA6NLU5 285 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 KDM4EB2RXH2 506 aaPredicted RBP18.35■□□□□ 0.53
RTN1-202ENST00000342503 GNB5O14775 395 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 GDF9O60383 454 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 TSPAN2O60636 221 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 ICOSLGO75144 302 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 LDOC1O95751 146 aaPredicted RBP18.35■□□□□ 0.53
RTN1-202ENST00000342503 SAGP10523 405 aaPredicted RBP18.35■□□□□ 0.53
RTN1-202ENST00000342503 LCN1P31025 176 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 COPZ1P61923 177 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 PLCXD2Q0VAA5 305 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 TRA2AQ13595 282 aaKnown RBP eCLIP18.35■□□□□ 0.53
RTN1-202ENST00000342503 ZNF367Q7RTV3 350 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 SLC34A3Q8N130 599 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 ANKK1Q8NFD2 765 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 PLEKHA8Q96JA3 519 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 ENKD1Q9H0I2 346 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 CARD8Q9Y2G2 431 aa18.35■□□□□ 0.53
RTN1-202ENST00000342503 GTPBP1O00178 669 aaKnown RBP18.34■□□□□ 0.53
RTN1-202ENST00000342503 PRODHO43272 600 aa18.34■□□□□ 0.53
RTN1-202ENST00000342503 HMGN1P05114 100 aa18.34■□□□□ 0.53
RTN1-202ENST00000342503 ZNF182P17025 639 aaPredicted RBP18.34■□□□□ 0.53
RTN1-202ENST00000342503 ZFP36L1Q07352 338 aaKnown RBP18.34■□□□□ 0.53
RTN1-202ENST00000342503 SKP2Q13309 424 aa18.34■□□□□ 0.53
RTN1-202ENST00000342503 BPHLQ86WA6 291 aaPredicted RBP18.34■□□□□ 0.53
RTN1-202ENST00000342503 OR52L1Q8NGH7 329 aa18.34■□□□□ 0.53
RTN1-202ENST00000342503 OMA1Q96E52 524 aa18.34■□□□□ 0.53
RTN1-202ENST00000342503 HSPBAP1Q96EW2 488 aa18.34■□□□□ 0.53
RTN1-202ENST00000342503 OR5M11Q96RB7 305 aa18.34■□□□□ 0.53
RTN1-202ENST00000342503 MED17Q9NVC6 651 aa18.34■□□□□ 0.53
RTN1-202ENST00000342503 SAGE2PA6NJ88 616 aa18.33■□□□□ 0.52
RTN1-202ENST00000342503 KHNYNO15037 678 aaKnown RBP18.33■□□□□ 0.52
RTN1-202ENST00000342503 ZNF264O43296 627 aa18.33■□□□□ 0.52
RTN1-202ENST00000342503 PTP4A3O75365 173 aa18.33■□□□□ 0.52
RTN1-202ENST00000342503 RCBTB2O95199 551 aa18.33■□□□□ 0.52
RTN1-202ENST00000342503 SLC2A10O95528 541 aa18.33■□□□□ 0.52
RTN1-202ENST00000342503 BCL10O95999 233 aa18.33■□□□□ 0.52
RTN1-202ENST00000342503 EMP2P54851 167 aa18.33■□□□□ 0.52
RTN1-202ENST00000342503 LSM3P62310 102 aaKnown RBP18.33■□□□□ 0.52
RTN1-202ENST00000342503 CRYZQ08257 329 aaKnown RBP18.33■□□□□ 0.52
RTN1-202ENST00000342503 IL11RAQ14626 422 aa18.33■□□□□ 0.52
RTN1-202ENST00000342503 ARMCX4Q5H9R4 360 aa18.33■□□□□ 0.52
RTN1-202ENST00000342503 RPL13AP3Q6NVV1 102 aa18.33■□□□□ 0.52
RTN1-202ENST00000342503 BMPERQ8N8U9 685 aa18.33■□□□□ 0.52
RTN1-202ENST00000342503 NFAM1Q8NET5 270 aaPredicted RBP18.33■□□□□ 0.52
RTN1-202ENST00000342503 OR52I1Q8NGK6 324 aa18.33■□□□□ 0.52
RTN1-202ENST00000342503 DNAJA4Q8WW22 397 aaPredicted RBP18.33■□□□□ 0.52
RTN1-202ENST00000342503 METTL21AQ8WXB1 218 aa18.33■□□□□ 0.52
RTN1-202ENST00000342503 C3orf49Q96BT1 292 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms