RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 POLE3Q9NRF9 147 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 EVA1BQ9NVM1 165 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 MED31Q9Y3C7 131 aa13.48□□□□□ -0.25
TDP2-201ENST00000341060 PLPP2O43688 288 aa13.47□□□□□ -0.25
TDP2-201ENST00000341060 CT62P0C5K7 136 aa13.47□□□□□ -0.25
TDP2-201ENST00000341060 PSKH1P11801 424 aa13.47□□□□□ -0.25
TDP2-201ENST00000341060 ACSL1P33121 698 aa13.47□□□□□ -0.25
TDP2-201ENST00000341060 SRP54P61011 504 aaKnown RBP13.47□□□□□ -0.25
TDP2-201ENST00000341060 TATDN3Q17R31 274 aa13.47□□□□□ -0.25
TDP2-201ENST00000341060 MANEAQ5SRI9 462 aa13.47□□□□□ -0.25
TDP2-201ENST00000341060 RNF44Q7L0R7 432 aa13.47□□□□□ -0.25
TDP2-201ENST00000341060 GPALPP1Q8IXQ4 340 aa13.47□□□□□ -0.25
TDP2-201ENST00000341060 OR10H4Q8NGA5 316 aa13.47□□□□□ -0.25
TDP2-201ENST00000341060 OR5T3Q8NGG3 340 aa13.47□□□□□ -0.25
TDP2-201ENST00000341060 OR5W2Q8NH69 310 aa13.47□□□□□ -0.25
TDP2-201ENST00000341060 RNF170Q96K19 258 aa13.47□□□□□ -0.25
TDP2-201ENST00000341060 FYTTD1Q96QD9 318 aaKnown RBP13.47□□□□□ -0.25
TDP2-201ENST00000341060 TEAD3Q99594 435 aa13.47□□□□□ -0.25
TDP2-201ENST00000341060 NDC1Q9BTX1 674 aa13.47□□□□□ -0.25
TDP2-201ENST00000341060 SLC35A3Q9Y2D2 325 aa13.47□□□□□ -0.25
TDP2-201ENST00000341060 ENTPD2Q9Y5L3 495 aa13.47□□□□□ -0.25
TDP2-201ENST00000341060 A0A0B4J2E0 115 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 A0A1B0GX12 115 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 C2orf74A8MZ97 194 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 GALR3O60755 368 aaPredicted RBP13.46□□□□□ -0.25
TDP2-201ENST00000341060 EGFP01133 1207 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 MT-ND5P03915 603 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 PVRP15151 417 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 ELK1P19419 428 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 DRD5P21918 477 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 SLC2A5P22732 501 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 LSSP48449 732 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 ADAM15Q13444 863 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 SF3A2Q15428 464 aaKnown RBP13.46□□□□□ -0.25
TDP2-201ENST00000341060 TRAM1Q15629 374 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 ALG11Q2TAA5 492 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 ABI3BPQ7Z7G0 1075 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 LRRC28Q86X40 367 aaPredicted RBP13.46□□□□□ -0.25
TDP2-201ENST00000341060 ASCC1Q8N9N2 400 aaKnown RBP13.46□□□□□ -0.25
TDP2-201ENST00000341060 UBASH3BQ8TF42 649 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 HOXB13Q92826 284 aaPredicted RBP13.46□□□□□ -0.25
TDP2-201ENST00000341060 MRGPRX1Q96LB2 322 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 ZNF559Q9BR84 538 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 TTYH2Q9BSA4 534 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 EVA1AQ9H8M9 152 aa13.46□□□□□ -0.25
TDP2-201ENST00000341060 TRAV27A0A087WT01 109 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 FAM25AB3EWG3 89 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 FAM25CB3EWG5 89 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 FAM25GB3EWG6 89 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 CHP2O43745 196 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 PTP4A3O75365 173 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 TRIM3O75382 744 aaPredicted RBP13.46□□□□□ -0.26
TDP2-201ENST00000341060 REM1O75628 298 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 RFPL3O75679 317 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 CHRNB1P11230 501 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 IL9P15248 144 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 ALAS2P22557 587 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 CTHP32929 405 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 GABRA3P34903 492 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 RPS7P62081 194 aaKnown RBP13.46□□□□□ -0.26
TDP2-201ENST00000341060 IDNKQ5T6J7 187 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 NOXA1Q86UR1 476 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 CA13Q8N1Q1 262 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 OR5M3Q8NGP4 307 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 KCTD12Q96CX2 325 aaKnown RBP13.46□□□□□ -0.26
TDP2-201ENST00000341060 ZNF426Q9BUY5 554 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 ADGRL4Q9HBW9 690 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 ZMIZ1Q9ULJ6 1067 aa13.46□□□□□ -0.26
TDP2-201ENST00000341060 TDRD6O60522 2096 aaKnown RBP13.45□□□□□ -0.26
TDP2-201ENST00000341060 HEATR5AQ86XA9 2040 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 GXYLT2A0PJZ3 443 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 FAM221BA6H8Z2 402 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 RIIAD1A6NNX1 92 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 NKX2-2O95096 273 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 YES1P07947 543 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 SBK2P0C263 348 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 NOS3P29474 1203 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 SLC16A1P53985 500 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 CLDN20P56880 219 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 TAS2R43P59537 309 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 ZAR1Q86SH2 424 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 PATE1Q8WXA2 126 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 UPRTQ96BW1 309 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 PPIL3Q9H2H8 161 aaKnown RBP13.45□□□□□ -0.26
TDP2-201ENST00000341060 TMEM27Q9HBJ8 222 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 POT1Q9NUX5 634 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 PAQR5Q9NXK6 330 aaPredicted RBP13.45□□□□□ -0.26
TDP2-201ENST00000341060 NLKQ9UBE8 527 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 EXTL2Q9UBQ6 330 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 BAIAP2Q9UQB8 552 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 A0A0J9YY10 115 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 FAM240BA0A1B0GVZ2 78 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 HRO43593 1189 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 SC5DO75845 299 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 ZNF3P17036 446 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 THBS2P35442 1172 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 YPEL5P62699 121 aa13.45□□□□□ -0.26
TDP2-201ENST00000341060 CSTF1Q05048 431 aaKnown RBP13.45□□□□□ -0.26
TDP2-201ENST00000341060 DLX2Q07687 328 aaPredicted RBP13.45□□□□□ -0.26
TDP2-201ENST00000341060 DBPQ10586 325 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms