RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 RCBTB2O95199 551 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 CSTAP01040 98 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 TFPTP0C1Z6 253 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 PRKCAP17252 672 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 BMP5P22003 454 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 RPS4Y1P22090 263 aaKnown RBP13.84□□□□□ -0.19
VAPA-201ENST00000340541 KRTAP21-3Q3LHN1 58 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 HSP90B2PQ58FF3 399 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 SLC25A53Q5H9E4 307 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 LRRC74BQ6ZQY2 392 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 TOR1AIP2Q8NFQ8 470 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 SMPDL3BQ92485 455 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 FIG4Q92562 907 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 NINJ1Q92982 152 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 ZNF845Q96IR2 970 aaPredicted RBP13.84□□□□□ -0.19
VAPA-201ENST00000340541 TM9SF2Q99805 663 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 EDARQ9UNE0 448 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 DSPPQ9NZW4 1301 aa13.84□□□□□ -0.19
VAPA-201ENST00000340541 A0A1W2PP18 115 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 CLDN24A6NM45 220 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 CLIC1O00299 241 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 DVL2O14641 736 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 ADAMDEC1O15204 470 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 IL18BPO95998 194 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 NUDT7P0C024 238 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 TMIGD3P0DMS9 266 aaPredicted RBP13.83□□□□□ -0.2
VAPA-201ENST00000340541 BMP2P12643 396 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 NCF2P19878 526 aaPredicted RBP13.83□□□□□ -0.2
VAPA-201ENST00000340541 CTSSP25774 331 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 ADH6P28332 368 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 SHC1P29353 583 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 EIF1P41567 113 aaKnown RBP13.83□□□□□ -0.2
VAPA-201ENST00000340541 CRATP43155 626 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 AGFG1P52594 562 aaKnown RBP13.83□□□□□ -0.2
VAPA-201ENST00000340541 DLX5P56178 289 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 EEFSECP57772 596 aaKnown RBP13.83□□□□□ -0.2
VAPA-201ENST00000340541 RAC1P63000 192 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 HPCAP84074 193 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 MYBPHQ13203 477 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 QPRTQ15274 297 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 RGNQ15493 299 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 EIF3MQ7L2H7 374 aaKnown RBP13.83□□□□□ -0.2
VAPA-201ENST00000340541 TMEM200AQ86VY9 491 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 GRAMD2AQ8IUY3 354 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 C10orf111Q8N326 155 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 FBXO27Q8NI29 283 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 SLC38A5Q8WUX1 472 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 ZFP3Q96NJ6 502 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 THUMPD3Q9BV44 507 aaKnown RBP13.83□□□□□ -0.2
VAPA-201ENST00000340541 TMEM120AQ9BXJ8 343 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 PINK1Q9BXM7 581 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 JKAMPQ9P055 326 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 GPC6Q9Y625 555 aaPredicted RBP13.83□□□□□ -0.2
VAPA-201ENST00000340541 GMEB1Q9Y692 573 aa13.83□□□□□ -0.2
VAPA-201ENST00000340541 ANKHD1Q8IWZ3 2542 aaKnown RBP13.82□□□□□ -0.2
VAPA-201ENST00000340541 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 A0A0J9YW62 118 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 SLC22A20A6NK97 555 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 SYT5O00445 386 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 ADAM11O75078 769 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 NUDT14O95848 222 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 OPN1LWP04000 364 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 UBTFL6P0CB48 400 aaPredicted RBP13.82□□□□□ -0.2
VAPA-201ENST00000340541 NR2F1P10589 423 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 ELK4P28324 431 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 DNAJA1P31689 397 aaKnown RBP13.82□□□□□ -0.2
VAPA-201ENST00000340541 ART1P52961 327 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 DSTNP60981 165 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 KCNJ10P78508 379 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 CBFBQ13951 182 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 FBXL19-AS1Q494R0 122 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 METTL21CQ5VZV1 264 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 DLEU7Q6UYE1 221 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 GCNT2Q8N0V5 402 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 TMCO5AQ8N6Q1 288 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 FNDC9Q8TBE3 224 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 PMM1Q92871 262 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 INTS12Q96CB8 462 aaKnown RBP13.82□□□□□ -0.2
VAPA-201ENST00000340541 LRRC46Q96FV0 321 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 MRGPRX4Q96LA9 322 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 RABEP2Q9H5N1 569 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 TMEM185BQ9H7F4 350 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 MTHFD2LQ9H903 347 aaPredicted RBP13.82□□□□□ -0.2
VAPA-201ENST00000340541 VAPAQ9P0L0 249 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 P2RX2Q9UBL9 471 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 TRIM33Q9UPN9 1127 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 SLC35A3Q9Y2D2 325 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 ZNF175Q9Y473 711 aa13.82□□□□□ -0.2
VAPA-201ENST00000340541 EIF1AYO14602 144 aaKnown RBP13.81□□□□□ -0.2
VAPA-201ENST00000340541 CTAG2O75638 210 aa13.81□□□□□ -0.2
VAPA-201ENST00000340541 CYP7B1O75881 506 aa13.81□□□□□ -0.2
VAPA-201ENST00000340541 TNFSF13O75888 250 aa13.81□□□□□ -0.2
VAPA-201ENST00000340541 BCHEP06276 602 aa13.81□□□□□ -0.2
VAPA-201ENST00000340541 NID1P14543 1247 aa13.81□□□□□ -0.2
VAPA-201ENST00000340541 OPRM1P35372 400 aa13.81□□□□□ -0.2
VAPA-201ENST00000340541 MDH1P40925 334 aaKnown RBP13.81□□□□□ -0.2
VAPA-201ENST00000340541 ASCL1P50553 236 aa13.81□□□□□ -0.2
VAPA-201ENST00000340541 CCR4P51679 360 aa13.81□□□□□ -0.2
VAPA-201ENST00000340541 RPS3AP61247 264 aaKnown RBP13.81□□□□□ -0.2
VAPA-201ENST00000340541 FADDQ13158 208 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms