RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ECHS1P30084 290 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 CDH15P55291 814 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 ACTC1P68032 377 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 ACTA1P68133 377 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 IDNKQ5T6J7 187 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 ADGRF3Q8IZF5 1079 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 OR13C3Q8NGS6 347 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 CLMPQ9H6B4 373 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 ING4Q9UNL4 249 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 IGHV5-10-1A0A0J9YXX1 117 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 C21orf140B9A014 251 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 ATXN7O15265 892 aaPredicted RBP11.9□□□□□ -0.5
LIN54-201ENST00000340417 FUT4P22083 530 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 CFL1P23528 166 aaKnown RBP11.9□□□□□ -0.5
LIN54-201ENST00000340417 GLO1Q04760 184 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 EIF2B1Q14232 305 aaKnown RBP11.9□□□□□ -0.5
LIN54-201ENST00000340417 SLC23A3Q6PIS1 610 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 LRRC18Q8N456 261 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 TMEM41AQ96HV5 264 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 TMEM45AQ9NWC5 275 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 SLC7A8Q9UHI5 535 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 ZNF337Q9Y3M9 751 aa11.9□□□□□ -0.5
LIN54-201ENST00000340417 IL18Q14116 193 aa11.9□□□□□ -0.51
LIN54-201ENST00000340417 SEC23BQ15437 767 aa11.9□□□□□ -0.51
LIN54-201ENST00000340417 MOGQ16653 247 aa11.9□□□□□ -0.51
LIN54-201ENST00000340417 OR5M9Q8NGP3 310 aa11.9□□□□□ -0.51
LIN54-201ENST00000340417 SAMD8Q96LT4 415 aa11.9□□□□□ -0.51
LIN54-201ENST00000340417 TMED9Q9BVK6 235 aa11.9□□□□□ -0.51
LIN54-201ENST00000340417 MND1Q9BWT6 205 aa11.9□□□□□ -0.51
LIN54-201ENST00000340417 RAB26Q9ULW5 256 aa11.9□□□□□ -0.51
LIN54-201ENST00000340417 LOC100130705A0A1B0GUX0 176 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 METTL21EPA6NDL7 271 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 SLC22A31A6NKX4 558 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 FAM25EA8MYX2 175 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 TIMM8AO60220 97 aaPredicted RBP11.89□□□□□ -0.51
LIN54-201ENST00000340417 CD22P20273 847 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 SOX2P48431 317 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 TAB1Q15750 504 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 ABCA11PQ4W5N1 156 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 OGFOD2Q6N063 350 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 OR11G2Q8NGC1 345 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 GATAD2BQ8WXI9 593 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 ZNF566Q969W8 418 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 CNIH4Q9P003 139 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 IER3IP1Q9Y5U9 82 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 SCN10AQ9Y5Y9 1956 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 ATG2BQ96BY7 2078 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 ITGB2P05107 769 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 PGAM2P15259 253 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 PEX2P28328 305 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 CDKN2CP42773 168 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 CPZQ66K79 652 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 ELP4Q96EB1 424 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 FAM171A2A8MVW0 826 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 ARL6IP5O75915 188 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 RLN1P04808 185 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 SLC36A2Q495M3 483 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 ENTPD8Q5MY95 495 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 TMEM211Q6ICI0 200 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 BCORP1Q8N888 145 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 OR11L1Q8NGX0 322 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 C11orf24Q96F05 449 aaPredicted RBP11.89□□□□□ -0.51
LIN54-201ENST00000340417 C1orf21Q9H246 121 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 PAQR5Q9NXK6 330 aaPredicted RBP11.89□□□□□ -0.51
LIN54-201ENST00000340417 VNN3Q9NY84 501 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 ZNF638Q14966 1978 aaKnown RBP11.89□□□□□ -0.51
LIN54-201ENST00000340417 PARP14Q460N5 1801 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 FAM90A27PA6NNH2 459 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 PEX11BO96011 259 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 ERVK-25P63136 954 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 B4GALNT1Q00973 533 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 NKAPLQ5M9Q1 402 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 BRIX1Q8TDN6 353 aaKnown RBP11.89□□□□□ -0.51
LIN54-201ENST00000340417 VRK1Q99986 396 aaPredicted RBP11.89□□□□□ -0.51
LIN54-201ENST00000340417 ABCB9Q9NP78 766 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 UBAP1Q9NZ09 502 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 COMMD9Q9P000 198 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 KLHL13Q9P2N7 655 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 SLC6A5Q9Y345 797 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 ENO4A6NNW6 628 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 GRK5P34947 590 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 SELENOWP63302 87 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 RHDQ02161 417 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 OCLNQ16625 522 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 OVCH1Q7RTY7 1134 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 ZNF227Q86WZ6 799 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 PSD4Q8NDX1 1056 aa11.89□□□□□ -0.51
LIN54-201ENST00000340417 LOC110117498-PIK3R3F6TDL0 507 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 CAPN3P20807 821 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 TRMT12Q53H54 448 aaKnown RBP11.88□□□□□ -0.51
LIN54-201ENST00000340417 PAGE3Q5JUK9 113 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 SLC6A19Q695T7 634 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 FAM131AQ6UXB0 335 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 BPIFA2Q96DR5 249 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 TMEM80Q96HE8 168 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 C3orf30Q96M34 536 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 LRFN3Q9BTN0 628 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 CCDC106Q9BWC9 280 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 DUSP13Q9UII6 198 aa11.88□□□□□ -0.51
LIN54-201ENST00000340417 EMCNQ9ULC0 261 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms