RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 SNX29P2Q8IUI4 249 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 CPOQ8IVL8 374 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 ALDH16A1Q8IZ83 802 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 CYB561A3Q8NBI2 242 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 ANKK1Q8NFD2 765 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 OR5M3Q8NGP4 307 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 TRMT61AQ96FX7 289 aaKnown RBP6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 CCDC74BQ96LY2 380 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 MGLLQ99685 303 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 SLC7A5P2Q9GIP4 190 aa6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 TRIM45Q9H8W5 580 aaPredicted RBP6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 HINT3Q9NQE9 182 aaKnown RBP6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 TESQ9UGI8 421 aaKnown RBP6.8□□□□□ -1.32
SRFBP1-201ENST00000339397 ANKRD33BA6NCL7 494 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 C2orf72A6NCS6 295 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 SERINC4A6NH21 518 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 C4orf47A7E2U8 309 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 MPZL2O60487 215 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 ICOSLGO75144 302 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 CSO75390 466 aaKnown RBP6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 AK1P00568 194 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 GSTM3P21266 225 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 IFNA8P32881 189 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 SLC9A3P48764 834 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 CCR4P51679 360 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 CLDN6P56747 220 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 TOMM34Q15785 309 aaPredicted RBP6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNF362Q5T0B9 420 aaPredicted RBP6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 PHF19Q5T6S3 580 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 OR5M10Q6IEU7 315 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 QSOX2Q6ZRP7 698 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 LINC00471Q8N535 108 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 TMEM163Q8TC26 289 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 PHOSPHO1Q8TCT1 267 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 TRUB1Q8WWH5 349 aaKnown RBP6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 C8orf44Q96CB5 159 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 CHCHD6Q9BRQ6 235 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 CDCA4Q9BXL8 241 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 ANKRD19PQ9H560 264 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 TMEM27Q9HBJ8 222 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 SIGLEC7Q9Y286 467 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 CACNA1CQ13936 2221 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 C2orf92A0A1B0GVN3 265 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 EFCAB10A6NFE3 127 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 UNC119BA6NIH7 251 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 EFCAB9A8MZ26 197 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 KHNYNO15037 678 aaKnown RBP6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 AIREO43918 545 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 REM1O75628 298 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 GYPBP06028 91 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNF28P17035 718 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 NOS3P29474 1203 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 IFNGR2P38484 337 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 CRYZQ08257 329 aaKnown RBP6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 OCLNQ16625 522 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 PLBD1Q6P4A8 553 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 POMZP3Q6PJE2 187 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 SLC46A3Q7Z3Q1 461 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 MRGPREQ86SM8 312 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 SLCO6A1Q86UG4 719 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 SLC15A4Q8N697 577 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 ZFP41Q8N8Y5 198 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 IFI44Q8TCB0 444 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 GATAD2BQ8WXI9 593 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 PTP4A1Q93096 173 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 TMEM203Q969S6 136 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 RNFT2Q96EX2 444 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 MVB12AQ96EY5 273 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 TMEM80Q96HE8 168 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 OPALINQ96PE5 141 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 OR1F2PQ96R84 312 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 DUSP23Q9BVJ7 150 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 CNOT2Q9NZN8 540 aaKnown RBP6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 YARS2Q9Y2Z4 477 aaKnown RBP6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 LSM2Q9Y333 95 aaKnown RBP6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 BHLHE40O14503 412 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 SCRG1O75711 98 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 UTS2O95399 124 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 INHBBP09529 407 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 CCL4P13236 92 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 OPRL1P41146 370 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 STAT5AP42229 794 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 PPICP45877 212 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 TGM4P49221 684 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 PRKCDQ05655 676 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 EBPQ15125 230 aaKnown RBP6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 PGGHGQ32M88 737 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 TMEM164Q5U3C3 297 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 LIPKQ5VXJ0 399 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 RHBDD2Q6NTF9 364 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 MARCH3Q86UD3 253 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 ATCAYQ86WG3 371 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 GRAMD2AQ8IUY3 354 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 FANK1Q8TC84 345 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 TM9SF4Q92544 642 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 OSTF1Q92882 214 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 Q96MT0 163 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNF559Q9BR84 538 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 G6PC3Q9BUM1 346 aa6.79□□□□□ -1.32
SRFBP1-201ENST00000339397 TAPBPLQ9BX59 468 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms