RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 ATP6V1G2-DDX39BF2Z307 99 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 DPM1O60762 260 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 EPCAMP16422 314 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 POLR2CP19387 275 aaPredicted RBP13.16□□□□□ -0.3
PCDH8-201ENST00000338862 ENPP1P22413 925 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 TRMT12Q53H54 448 aaKnown RBP13.16□□□□□ -0.3
PCDH8-201ENST00000338862 TCTE1Q5JU00 501 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 TMEM69Q5SWH9 247 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 ZNF782Q6ZMW2 699 aaPredicted RBP13.16□□□□□ -0.3
PCDH8-201ENST00000338862 LINC00471Q8N535 108 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 METTL27Q8N6F8 245 aaPredicted RBP13.16□□□□□ -0.3
PCDH8-201ENST00000338862 SPERTQ8NA61 448 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 ZBTB44Q8NCP5 570 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 TMEM239Q8WW34 195 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 BPIFA2Q96DR5 249 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 PINK1Q9BXM7 581 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 KCNN3Q9UGI6 736 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 KCND3Q9UK17 655 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 A8MVJ9 347 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 IDSB3KWA1 339 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 SURF4O15260 269 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 IFNA16P05015 189 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 ZNF888P0CJ79 500 aaPredicted RBP13.16□□□□□ -0.3
PCDH8-201ENST00000338862 NPR2P20594 1047 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 GDI2P50395 445 aaKnown RBP13.16□□□□□ -0.3
PCDH8-201ENST00000338862 RGS1Q08116 209 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 ST3GAL2Q16842 350 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 TMEM31Q5JXX7 168 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 TMEM91Q6ZNR0 172 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 ERN2Q76MJ5 926 aaKnown RBP13.16□□□□□ -0.3
PCDH8-201ENST00000338862 MEPCEQ7L2J0 689 aaKnown RBP13.16□□□□□ -0.3
PCDH8-201ENST00000338862 TMPRSS12Q86WS5 348 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 CPA6Q8N4T0 437 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 OR52B4Q8NGK2 314 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 HCAR2Q8TDS4 363 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 MS4A3Q96HJ5 214 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 HS6ST2Q96MM7 605 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 MARVELD1Q9BSK0 173 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 FBXO34Q9NWN3 711 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 TESQ9UGI8 421 aaKnown RBP13.16□□□□□ -0.3
PCDH8-201ENST00000338862 SCN10AQ9Y5Y9 1956 aa13.16□□□□□ -0.3
PCDH8-201ENST00000338862 CENPVL1A0A0U1RR11 272 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 IFNGP01579 166 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 HPXP02790 462 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 RAF1P04049 648 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 STARP49675 285 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 ELOAQ14241 798 aaKnown RBP13.15□□□□□ -0.3
PCDH8-201ENST00000338862 MRPL2Q5T653 305 aaKnown RBP13.15□□□□□ -0.3
PCDH8-201ENST00000338862 RTL4Q6ZR62 310 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 ZNF687Q8N1G0 1237 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 C9orf62Q8N4C0 152 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 ZDHHC1Q8WTX9 485 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 FCRL1Q96LA6 429 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 IER3IP1Q9Y5U9 82 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 LRIT2A6NDA9 550 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 OR2W5A6NFC9 320 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 RCBTB2O95199 551 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 CFDP00746 253 aaPredicted RBP13.15□□□□□ -0.3
PCDH8-201ENST00000338862 WNT1P04628 370 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 PVRP15151 417 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 LAMTOR1Q6IAA8 161 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 SLITRK4Q8IW52 837 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 SLC35A4Q96G79 324 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 CBLCQ9ULV8 474 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 FARSAQ9Y285 508 aaKnown RBP13.15□□□□□ -0.3
PCDH8-201ENST00000338862 A0A1W2PPL8 197 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 H3BUI4 141 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 CACNB4O00305 520 aaPredicted RBP13.15□□□□□ -0.3
PCDH8-201ENST00000338862 PRICKLE3O43900 615 aaPredicted RBP13.15□□□□□ -0.3
PCDH8-201ENST00000338862 ACTR1BP42025 376 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 STAT5AP42229 794 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 ERVFC1P60507 584 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 ACTR1AP61163 376 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 TEKQ02763 1124 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 KCNAB1Q14722 419 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 DEFB110Q30KQ9 67 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 SCGB2B2Q4G0G5 96 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 ZNF542PQ5EBM4 170 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 YAF2Q8IY57 180 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 FBXL6Q8N531 539 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 MORN4Q8NDC4 146 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 ST8SIA2Q92186 375 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 SFXN2Q96NB2 322 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 DHRS9Q9BPW9 319 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.15□□□□□ -0.3
PCDH8-201ENST00000338862 SLC38A1Q9H2H9 487 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 DIABLOQ9NR28 239 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 MBNL1Q9NR56 388 aaKnown RBP13.15□□□□□ -0.3
PCDH8-201ENST00000338862 CALML5Q9NZT1 146 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 KCMF1Q9P0J7 381 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 ZNF346Q9UL40 294 aaKnown RBP13.15□□□□□ -0.3
PCDH8-201ENST00000338862 ADAM18Q9Y3Q7 739 aa13.15□□□□□ -0.3
PCDH8-201ENST00000338862 TVP23AA6NH52 213 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 ANXA2P2A6NMY6 339 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 STK25O00506 426 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 ADH1CP00326 375 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 ANXA2P07355 339 aaKnown RBP13.14□□□□□ -0.31
PCDH8-201ENST00000338862 SLC35G6P0C7Q6 338 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 CMPK1P30085 196 aa13.14□□□□□ -0.31
PCDH8-201ENST00000338862 HTR1FP30939 366 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms