RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 SLC22A31A6NKX4 558 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 GABRR3A8MPY1 467 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 HEPACAM2A8MVW5 462 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 EPCAMP16422 314 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 CXCL3P19876 107 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 SORDQ00796 357 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 ARHGAP40Q5TG30 622 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 LAIR2Q6ISS4 152 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 MEX3DQ86XN8 651 aaKnown RBP15.07■□□□□ 0
NPHP3-201ENST00000337331 CHFRQ96EP1 664 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 PTCHD1Q96NR3 888 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 PITHD1Q9GZP4 211 aaPredicted RBP15.07■□□□□ 0
NPHP3-201ENST00000337331 IL21RQ9HBE5 538 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 SLC6A20Q9NP91 592 aa15.07■□□□□ 0
NPHP3-201ENST00000337331 C13orf42A0A1B0GVH6 325 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 F5H5P2 479 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 B4GALT3O60512 393 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 IL1RNP18510 177 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 HSD11B1P28845 292 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 EVX1P49640 407 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 CTSCP53634 463 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 PLBD1Q6P4A8 553 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 TAS1R1Q7RTX1 841 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 HSD11B1LQ7Z5J1 315 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 KLHDC9Q8NEP7 349 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 SGK3Q96BR1 496 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 C3orf49Q96BT1 292 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 MVB12BQ9H7P6 319 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 NOX3Q9HBY0 568 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 SDHAF3Q9NRP4 125 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 FARSAQ9Y285 508 aaKnown RBP15.06■□□□□ 0
NPHP3-201ENST00000337331 TRBV2A0A0J9YWF9 115 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 NPIPA5E9PKD4 350 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 TMEM189-UBE2V1I3L0A0 370 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 FRS3O43559 492 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 HCRTR2O43614 444 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 PTP4A3O75365 173 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 GASTP01350 101 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 ELK1P19419 428 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 TAF1P21675 1872 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 C9orf152Q5JTZ5 239 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 FAM74A1Q5RGS3 127 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 ZNF704Q6ZNC4 412 aaPredicted RBP15.06■□□□□ 0
NPHP3-201ENST00000337331 LIX1LQ8IVB5 337 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 PNLDC1Q8NA58 520 aaKnown RBP15.06■□□□□ 0
NPHP3-201ENST00000337331 ZDHHC12Q96GR4 267 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 CDCA4Q9BXL8 241 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 PRTFDC1Q9NRG1 225 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 ZNF226Q9NYT6 803 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 MIOXQ9UGB7 285 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 NPIPA1Q9UND3 350 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 SC5DO75845 299 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 S100A8P05109 93 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 ADH7P40394 386 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 SSX1Q16384 188 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 CTSL3PQ5NE16 218 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 MARVELD3Q96A59 401 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 MS4A4AQ96JQ5 239 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 WDR92Q96MX6 357 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 CLMPQ9H6B4 373 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 FZD3Q9NPG1 666 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 SLC6A5Q9Y345 797 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 GABRPO00591 440 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 CYB5AP00167 134 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 ADRB3P13945 408 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 PCGF2P35227 344 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 DLX5P56178 289 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 LGALSLQ3ZCW2 172 aaPredicted RBP15.06■□□□□ 0
NPHP3-201ENST00000337331 C6orf132Q5T0Z8 1188 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 TMUB2Q71RG4 321 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 NAA40Q86UY6 237 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 PGBD5Q8N414 524 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 RNF170Q96K19 258 aa15.06■□□□□ 0
NPHP3-201ENST00000337331 KLF16Q9BXK1 252 aaPredicted RBP15.06■□□□□ 0
NPHP3-201ENST00000337331 ZNF878C9JN71 531 aa15.05■□□□□ 0
NPHP3-201ENST00000337331 LY86O95711 162 aa15.05■□□□□ 0
NPHP3-201ENST00000337331 UCHL1P09936 223 aa15.05■□□□□ 0
NPHP3-201ENST00000337331 ULK3Q6PHR2 472 aa15.05■□□□□ 0
NPHP3-201ENST00000337331 ZNF546Q86UE3 836 aa15.05■□□□□ 0
NPHP3-201ENST00000337331 CASTOR1Q8WTX7 329 aa15.05■□□□□ 0
NPHP3-201ENST00000337331 SLC19A3Q9BZV2 496 aa15.05■□□□□ 0
NPHP3-201ENST00000337331 CNIH4Q9P003 139 aa15.05■□□□□ 0
NPHP3-201ENST00000337331 SH2B3Q9UQQ2 575 aa15.05■□□□□ 0
NPHP3-201ENST00000337331 SIPA1L3O60292 1781 aaPredicted RBP15.05■□□□□ 0
NPHP3-201ENST00000337331 PRAF2O60831 178 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 ACTC1P68032 377 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 ACTA1P68133 377 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 MAPK14Q16539 360 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 OR56A3Q8NH54 315 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 ARL11Q969Q4 196 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 KLHDC7BQ96G42 594 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 FAM83CQ9BQN1 747 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 BARHL1Q9BZE3 327 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 METTL8Q9H825 291 aaKnown RBP15.05■□□□□ -0
NPHP3-201ENST00000337331 KLRF1Q9NZS2 232 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 POMT2Q9UKY4 750 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 TRBV23-1A0A0A0MS06 115 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 GXYLT2A0PJZ3 443 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 ANTXRLA6NF34 631 aa15.05■□□□□ -0
NPHP3-201ENST00000337331 AIPO00170 330 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms