RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 KATNB1Q9BVA0 655 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 FOLH1BQ9HBA9 442 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 IL20Q9NYY1 176 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 CCDC59Q9P031 241 aaKnown RBP8.17□□□□□ -1.1
SNCA-201ENST00000336904 PTGFRNQ9P2B2 879 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 SEC14L4Q9UDX3 406 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 PLEKHB1Q9UF11 243 aaPredicted RBP8.17□□□□□ -1.1
SNCA-201ENST00000336904 TBC1D24Q9ULP9 559 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 CDH10Q9Y6N8 788 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 V9GYH0 126 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 A0A1B0GVT2 93 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 A0A1W2PPC4 97 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 J3QLW9 94 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 KHNYNO15037 678 aaKnown RBP8.17□□□□□ -1.1
SNCA-201ENST00000336904 ZNF19P17023 458 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 BMP7P18075 431 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 TCEA1P23193 301 aaKnown RBP8.17□□□□□ -1.1
SNCA-201ENST00000336904 TSFMP43897 325 aaKnown RBP8.17□□□□□ -1.1
SNCA-201ENST00000336904 RAB25P57735 213 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 YPEL5P62699 121 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 NDUFA9Q16795 377 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 MTFR2Q6P444 385 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 CHRDL2Q6WN34 429 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 C16orf47Q6ZP98 133 aaPredicted RBP8.17□□□□□ -1.1
SNCA-201ENST00000336904 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.17□□□□□ -1.1
SNCA-201ENST00000336904 OAFQ86UD1 273 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 CCDC190Q86UF4 302 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 C10orf53Q8N6V4 93 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 CLDN22Q8N7P3 220 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 OSTF1Q92882 214 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 UFD1Q92890 307 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 PTP4A1Q93096 173 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 HSPA12BQ96MM6 686 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 TSSK2Q96PF2 358 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 OR8D2Q9GZM6 311 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 TMEM165Q9HC07 324 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 POMT2Q9UKY4 750 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 PEX16Q9Y5Y5 336 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 PCNX3Q9H6A9 2034 aa8.17□□□□□ -1.1
SNCA-201ENST00000336904 A0A1W2PRG6 482 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 IDSB3KWA1 339 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 H7C1C5 153 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 BRINP1O60477 761 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 TMCC2O75069 709 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 PAICSP22234 425 aaKnown RBP8.16□□□□□ -1.1
SNCA-201ENST00000336904 MLLT3P42568 568 aaPredicted RBP8.16□□□□□ -1.1
SNCA-201ENST00000336904 CD97P48960 835 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 OR1D5P58170 312 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 OR12D2P58182 307 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 LCN6P62502 163 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 RPL6Q02878 288 aaKnown RBP8.16□□□□□ -1.1
SNCA-201ENST00000336904 FZD5Q13467 585 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 TP53I3Q53FA7 332 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 KLHL22Q53GT1 634 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 PYDC2Q56P42 97 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 VASNQ6EMK4 673 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 CBLN3Q6UW01 205 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 PRR23CQ6ZRP0 262 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 NR2C2APQ86WQ0 139 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 SLC37A3Q8NCC5 494 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 C17orf47Q8NEP4 570 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 ATP6V1C2Q8NEY4 427 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 OR52L1Q8NGH7 329 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 C16orf52Q8NHV5 167 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 HS6ST2Q96MM7 605 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 ORAI3Q9BRQ5 295 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 PRRG3Q9BZD7 231 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 NXF2Q9GZY0 626 aaKnown RBP8.16□□□□□ -1.1
SNCA-201ENST00000336904 PRTFDC1Q9NRG1 225 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 ZDBF2Q9HCK1 2354 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 KDM4EB2RXH2 506 aaPredicted RBP8.16□□□□□ -1.1
SNCA-201ENST00000336904 GABRPO00591 440 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 KLF4O43474 513 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 OR5F1O95221 314 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 DBIP07108 87 aaKnown RBP8.16□□□□□ -1.1
SNCA-201ENST00000336904 PROS1P07225 676 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 CHRNB1P11230 501 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 CPEP16870 476 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 S1PR1P21453 382 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 RCVRNP35243 200 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 PSPHP78330 225 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 FOXK2Q01167 660 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 RAB40BQ12829 278 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 VWA2Q5GFL6 755 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 FAM69BQ5VUD6 431 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 TSSK4Q6SA08 328 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 CD300LDQ6UXZ3 194 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 OR52E2Q8NGJ4 325 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 OR5M3Q8NGP4 307 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 NEIL3Q8TAT5 605 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 KCTD7Q96MP8 289 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 ERMAPQ96PL5 475 aaPredicted RBP8.16□□□□□ -1.1
SNCA-201ENST00000336904 ELF4Q99607 663 aaPredicted RBP8.16□□□□□ -1.1
SNCA-201ENST00000336904 ALG8Q9BVK2 526 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 SEMA6CQ9H3T2 930 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 ZNF223Q9UK11 482 aaPredicted RBP8.16□□□□□ -1.1
SNCA-201ENST00000336904 SF3B6Q9Y3B4 125 aaKnown RBP8.16□□□□□ -1.1
SNCA-201ENST00000336904 IGHV1OR15-9A0A0B4J2B8 117 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 IGHV3-20A0A0C4DH32 117 aa8.16□□□□□ -1.1
SNCA-201ENST00000336904 DAPL1A0PJW8 107 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms