RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 GINS3Q9BRX5 216 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 ZNF768Q9H5H4 540 aaKnown RBP9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 RDH14Q9HBH5 336 aa9.77□□□□□ -0.84
SPTBN1-201ENST00000333896 ZGRF1Q86YA3 2104 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 WNK3Q9BYP7 1800 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 TRAF3IP2O43734 574 aaPredicted RBP9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 RPLP1P05386 114 aaKnown RBP9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 HNRNPA3P51991 378 aaKnown RBP9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 SEMA3BQ13214 749 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 GPR142Q7Z601 462 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 FAM217AQ8IXS0 508 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 Q8N9G6 341 aaPredicted RBP9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 ZNF417Q8TAU3 575 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 OR8D2Q9GZM6 311 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 OCEL1Q9H607 264 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 SDR39U1Q9NRG7 319 aaPredicted RBP9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 YLPM1P49750 1951 aaKnown RBP9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 SLC31A1O15431 190 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 TGFB1I1O43294 461 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 C1GALT1C1LP0DN25 315 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 HLA-DOBP13765 273 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 CSNK2A2P19784 350 aaPredicted RBP9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 FOXK1P85037 733 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 SP2Q02086 613 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 LYRM7Q5U5X0 104 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 OR4F3Q6IEY1 312 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 B3GNT8Q7Z7M8 397 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 C4orf32Q8N8J7 132 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 RELL2Q8NC24 303 aaPredicted RBP9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 SLC35B4Q969S0 331 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 ESAMQ96AP7 390 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 PTDSS2Q9BVG9 487 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 CAPNS1P04632 268 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 PCP4P48539 62 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 DAOAP59103 153 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 HIST1H3AP68431 136 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 ZNF763Q0D2J5 394 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 MSS51Q4VC12 460 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 TECPR1Q7Z6L1 1165 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 STEAP2Q8NFT2 490 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 NDRG1Q92597 394 aaKnown RBP9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 HMCESQ96FZ2 354 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 ZNF582Q96NG8 517 aaPredicted RBP9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 SORCS2Q96PQ0 1159 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 RNF150Q9ULK6 438 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 A0A0A6YYJ9 748 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 A0A0B4J2A0 478 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 TSPAN12O95859 305 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 ADORA3P0DMS8 318 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 HBG1P69891 147 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 HBG2P69892 147 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 FOXO1Q12778 655 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 FAM180BQ6P0A1 224 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 MFSD9Q8NBP5 474 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 OR4E2Q8NGC2 313 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 SLC2A12Q8TD20 617 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 SUCNR1Q9BXA5 334 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 SHPKQ9UHJ6 478 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 HES2Q9Y543 173 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 DOCK6Q96HP0 2047 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 TMEM82A0PJX8 343 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 LYPLA2O95372 231 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 GBAP04062 536 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 GABRR2P28476 465 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 LAX1Q8IWV1 398 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 TOP6BLQ8N6T0 577 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 OR5W2Q8NH69 310 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 BBS10Q8TAM1 723 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 PHYHIPQ92561 330 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 TOMM40LQ969M1 308 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 BPIFA2Q96DR5 249 aa9.77□□□□□ -0.85
SPTBN1-201ENST00000333896 SDHDO14521 159 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 CLDN11O75508 207 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 CDC123O75794 336 aaPredicted RBP9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 ZNF74Q16587 644 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 ALG8Q9BVK2 526 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 Q9N2J8 555 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 SEMA4GQ9NTN9 838 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 OR6C75A6NL08 312 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 ERI3O43414 337 aaKnown RBP9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 PCGF2P35227 344 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 ADRA1BP35368 520 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 POU3F4P49335 361 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 F2RL1P55085 397 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 HMGCS1Q01581 520 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 FAM209AQ5JX71 171 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 GLIS3Q8NEA6 775 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 L3HYPDHQ96EM0 354 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 PHYHIPLQ96FC7 376 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 WFIKKN1Q96NZ8 548 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 FCRL5Q96RD9 977 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 TDP1Q9NUW8 608 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 PLEKHJ1Q9NW61 149 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 DIP2AQ14689 1571 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 ZNF98A6NK75 572 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 SLC16A6O15403 523 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 HOXB1P14653 301 aaPredicted RBP9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 ETV3LQ6ZN32 361 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 ZNF836Q6ZNA1 936 aa9.76□□□□□ -0.85
SPTBN1-201ENST00000333896 SAMD7Q7Z3H4 446 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms