RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 LURAP1Q96LR2 239 aa15.46■□□□□ 0.07
PTCH1-201ENST00000331920 WDR92Q96MX6 357 aa15.46■□□□□ 0.07
PTCH1-201ENST00000331920 APOBEC3GQ9HC16 384 aaKnown RBP15.46■□□□□ 0.07
PTCH1-201ENST00000331920 HEBP1Q9NRV9 189 aa15.46■□□□□ 0.07
PTCH1-201ENST00000331920 ZNF468Q5VIY5 522 aaPredicted RBP15.46■□□□□ 0.07
PTCH1-201ENST00000331920 PNCKQ6P2M8 343 aa15.46■□□□□ 0.07
PTCH1-201ENST00000331920 FAM57BQ71RH2 274 aa15.46■□□□□ 0.07
PTCH1-201ENST00000331920 NCR1O76036 304 aa15.46■□□□□ 0.06
PTCH1-201ENST00000331920 YIF1AO95070 293 aa15.46■□□□□ 0.06
PTCH1-201ENST00000331920 ZNF728P0DKX0 622 aa15.46■□□□□ 0.06
PTCH1-201ENST00000331920 IKZF1Q13422 519 aa15.46■□□□□ 0.06
PTCH1-201ENST00000331920 PIP5KL1Q5T9C9 394 aa15.46■□□□□ 0.06
PTCH1-201ENST00000331920 FKBP1CQ5VVH2 108 aa15.46■□□□□ 0.06
PTCH1-201ENST00000331920 NLRC3Q7RTR2 1065 aa15.46■□□□□ 0.06
PTCH1-201ENST00000331920 OR52H1Q8NGJ2 320 aa15.46■□□□□ 0.06
PTCH1-201ENST00000331920 BMFQ96LC9 184 aa15.46■□□□□ 0.06
PTCH1-201ENST00000331920 ARV1Q9H2C2 271 aa15.46■□□□□ 0.06
PTCH1-201ENST00000331920 OR51J1Q9H342 316 aa15.46■□□□□ 0.06
PTCH1-201ENST00000331920 ATP6V1G2-DDX39BF2Z307 99 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 H0YAE9 185 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 LGALS8O00214 317 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 CXADRP78310 365 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 DUSP7Q16829 419 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 DESI1Q6ICB0 168 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 ZNF596Q8TC21 504 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 SCAMP4Q969E2 229 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 C4orf36Q96KX1 117 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 TPSD1Q9BZJ3 242 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 GNG12Q9UBI6 72 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 SLC6A14Q9UN76 642 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 TMEM235A6NFC5 223 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 RNF212BA8MTL3 300 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 CRABP1P29762 137 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 HADHBP55084 474 aaKnown RBP15.45■□□□□ 0.06
PTCH1-201ENST00000331920 TAS2R38P59533 333 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 ILKQ13418 452 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 NKX3-1Q99801 234 aaPredicted RBP15.45■□□□□ 0.06
PTCH1-201ENST00000331920 BCL7BQ9BQE9 202 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 CRB3Q9BUF7 120 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 SSUH2Q9Y2M2 353 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 EPOP01588 193 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 UBBP0CG47 229 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 UBCP0CG48 685 aaKnown RBP15.45■□□□□ 0.06
PTCH1-201ENST00000331920 HTRA4P83105 476 aaPredicted RBP15.45■□□□□ 0.06
PTCH1-201ENST00000331920 TLE4Q04727 773 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 ZNF704Q6ZNC4 412 aaPredicted RBP15.45■□□□□ 0.06
PTCH1-201ENST00000331920 NOXA1Q86UR1 476 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 NME2P22392 152 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 RPS5P46782 204 aaKnown RBP15.45■□□□□ 0.06
PTCH1-201ENST00000331920 STC1P52823 247 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 MKXQ8IYA7 352 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 ERVMER34-1Q9H9K5 563 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 B4GALT6Q9UBX8 382 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 SALL4Q9UJQ4 1053 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 PTRH2Q9Y3E5 179 aaKnown RBP15.45■□□□□ 0.06
PTCH1-201ENST00000331920 PSAT1Q9Y617 370 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 CTU1Q7Z7A3 348 aaKnown RBP15.45■□□□□ 0.06
PTCH1-201ENST00000331920 NANPQ8TBE9 248 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 ASB11Q8WXH4 323 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 EPHA5P54756 1037 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 PRPS1P60891 318 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 APOOLQ6UXV4 268 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 TSSK2Q96PF2 358 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 OR52A5Q9H2C5 316 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 IER3IP1Q9Y5U9 82 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 NFKBIEO00221 500 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 MAOBP27338 520 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 GATMP50440 423 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 RBPJQ06330 500 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 EXOSC2Q13868 293 aaKnown RBP15.45■□□□□ 0.06
PTCH1-201ENST00000331920 C15orf52Q6ZUT6 534 aaKnown RBP15.45■□□□□ 0.06
PTCH1-201ENST00000331920 PLD6Q8N2A8 252 aaKnown RBP15.45■□□□□ 0.06
PTCH1-201ENST00000331920 CPXM2Q8N436 756 aa15.45■□□□□ 0.06
PTCH1-201ENST00000331920 RFXAPO00287 272 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 SCAMP2O15127 329 aaKnown RBP15.44■□□□□ 0.06
PTCH1-201ENST00000331920 PTP4A2Q12974 167 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 MLF2Q15773 248 aaPredicted RBP15.44■□□□□ 0.06
PTCH1-201ENST00000331920 ACSM3Q53FZ2 586 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 SLC15A4Q8N697 577 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 ADAMTS10Q9H324 1103 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 NFYBP25208 207 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 SSX9Q7RTT3 188 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 SUMF1Q8NBK3 374 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 OR8J3Q8NGG0 315 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 OR51E2Q9H255 320 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 NMNAT1Q9HAN9 279 aaPredicted RBP15.44■□□□□ 0.06
PTCH1-201ENST00000331920 F6UZH7 168 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 SGK494L7N484 410 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 PROS1P07225 676 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 METTL15P1P0C7V9 234 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 HOXC8P31273 242 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 CXCR4P61073 352 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 ZNF33BQ06732 778 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 CCL14Q16627 93 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 CTSL3PQ5NE16 218 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 C2CD4AQ8NCU7 369 aaPredicted RBP15.44■□□□□ 0.06
PTCH1-201ENST00000331920 CMSS1Q9BQ75 279 aaKnown RBP15.44■□□□□ 0.06
PTCH1-201ENST00000331920 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.44■□□□□ 0.06
PTCH1-201ENST00000331920 INIPQ9NRY2 104 aa15.44■□□□□ 0.06
PTCH1-201ENST00000331920 C18orf63Q68DL7 685 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms