RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 GJE1A6NN92 205 aa24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 A8MXE2 369 aa24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 TNFSF11O14788 317 aa24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 MSTNO14793 375 aa24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 EDF1O60869 148 aaKnown RBP24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 SYNGR4O95473 234 aa24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 UBTFL6P0CB48 400 aaPredicted RBP24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 IL11P20809 199 aa24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 KIR2DL2P43627 348 aaPredicted RBP24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 QPRTQ15274 297 aa24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 MAPK14Q16539 360 aa24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 HBMQ6B0K9 141 aa24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 TMEM200AQ86VY9 491 aa24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 PNPT1Q8TCS8 783 aaKnown RBP24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 ZFP90Q8TF47 636 aa24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 EBF4Q9BQW3 602 aa24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 THUMPD3Q9BV44 507 aaKnown RBP24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 GALNT8Q9NY28 637 aa24.79■■□□□ 1.56
ATPAF1-201ENST00000329231 CXCL13O43927 109 aa24.78■■□□□ 1.56
ATPAF1-201ENST00000329231 SMNDC1O75940 238 aaKnown RBP eCLIP24.78■■□□□ 1.56
ATPAF1-201ENST00000329231 AQP8O94778 261 aa24.78■■□□□ 1.56
ATPAF1-201ENST00000329231 SFTPDP35247 375 aa24.78■■□□□ 1.56
ATPAF1-201ENST00000329231 CHRNEQ04844 493 aa24.78■■□□□ 1.56
ATPAF1-201ENST00000329231 SYPL1Q16563 259 aa24.78■■□□□ 1.56
ATPAF1-201ENST00000329231 SLC25A53Q5H9E4 307 aa24.78■■□□□ 1.56
ATPAF1-201ENST00000329231 COX20Q5RI15 118 aa24.78■■□□□ 1.56
ATPAF1-201ENST00000329231 C6orf10Q5SRN2 563 aa24.78■■□□□ 1.56
ATPAF1-201ENST00000329231 VWA1Q6PCB0 445 aa24.78■■□□□ 1.56
ATPAF1-201ENST00000329231 LRRC74BQ6ZQY2 392 aa24.78■■□□□ 1.56
ATPAF1-201ENST00000329231 ANKFN1Q8N957 763 aa24.78■■□□□ 1.56
ATPAF1-201ENST00000329231 VPS33AQ96AX1 596 aa24.78■■□□□ 1.56
ATPAF1-201ENST00000329231 TIGARQ9NQ88 270 aa24.78■■□□□ 1.56
ATPAF1-201ENST00000329231 ST6GALNAC1Q9NSC7 600 aaPredicted RBP24.78■■□□□ 1.56
ATPAF1-201ENST00000329231 SLC6A13Q9NSD5 602 aa24.78■■□□□ 1.56
ATPAF1-201ENST00000329231 LRBAP50851 2863 aa24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 ENO4A6NNW6 628 aa24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 ETV2O00321 342 aaPredicted RBP24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 EFNA2O43921 213 aa24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 DNAJA2O60884 412 aa24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 NTN1O95631 604 aa24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 NR2F1P10589 423 aa24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 PGCP20142 388 aa24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 PGM1P36871 562 aa24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 CARD18P57730 90 aa24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 SIRPAP78324 504 aa24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 BTLAQ7Z6A9 289 aa24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 TMEM234Q8WY98 164 aa24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 ST8SIA1Q92185 356 aa24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 OSTF1Q92882 214 aa24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 ZG16BQ96DA0 208 aa24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 TPT1P8Q9HAU6 139 aa24.77■■□□□ 1.56
ATPAF1-201ENST00000329231 PLGP00747 810 aaPredicted RBP24.76■■□□□ 1.55
ATPAF1-201ENST00000329231 SLC6A8P48029 635 aa24.76■■□□□ 1.55
ATPAF1-201ENST00000329231 KCNJ10P78508 379 aa24.76■■□□□ 1.55
ATPAF1-201ENST00000329231 SELENBP1Q13228 472 aa24.76■■□□□ 1.55
ATPAF1-201ENST00000329231 GUSBP1Q15486 140 aa24.76■■□□□ 1.55
ATPAF1-201ENST00000329231 TMEM176BQ3YBM2 270 aaPredicted RBP24.76■■□□□ 1.55
ATPAF1-201ENST00000329231 FAM214BQ7L5A3 538 aa24.76■■□□□ 1.55
ATPAF1-201ENST00000329231 FAM71CQ8NEG0 241 aa24.76■■□□□ 1.55
ATPAF1-201ENST00000329231 STON2Q8WXE9 905 aa24.76■■□□□ 1.55
ATPAF1-201ENST00000329231 PMM1Q92871 262 aa24.76■■□□□ 1.55
ATPAF1-201ENST00000329231 SLC38A1Q9H2H9 487 aa24.76■■□□□ 1.55
ATPAF1-201ENST00000329231 MTHFD2LQ9H903 347 aaPredicted RBP24.76■■□□□ 1.55
ATPAF1-201ENST00000329231 ANKHD1Q8IWZ3 2542 aaKnown RBP24.76■■□□□ 1.55
ATPAF1-201ENST00000329231 CHRM4P08173 479 aa24.75■■□□□ 1.55
ATPAF1-201ENST00000329231 EPXP11678 715 aa24.75■■□□□ 1.55
ATPAF1-201ENST00000329231 SHC1P29353 583 aa24.75■■□□□ 1.55
ATPAF1-201ENST00000329231 CPOXP36551 454 aa24.75■■□□□ 1.55
ATPAF1-201ENST00000329231 CRATP43155 626 aa24.75■■□□□ 1.55
ATPAF1-201ENST00000329231 IRX1P78414 480 aaPredicted RBP24.75■■□□□ 1.55
ATPAF1-201ENST00000329231 ZNF524Q96C55 264 aa24.75■■□□□ 1.55
ATPAF1-201ENST00000329231 REXO5Q96IC2 774 aaKnown RBP24.75■■□□□ 1.55
ATPAF1-201ENST00000329231 GMPPAQ96IJ6 420 aaPredicted RBP24.75■■□□□ 1.55
ATPAF1-201ENST00000329231 SIKE1Q9BRV8 207 aa24.75■■□□□ 1.55
ATPAF1-201ENST00000329231 QRSL1Q9H0R6 528 aaKnown RBP24.75■■□□□ 1.55
ATPAF1-201ENST00000329231 GLRX2Q9NS18 164 aa24.75■■□□□ 1.55
ATPAF1-201ENST00000329231 P2RX2Q9UBL9 471 aa24.75■■□□□ 1.55
ATPAF1-201ENST00000329231 EMC9Q9Y3B6 208 aa24.75■■□□□ 1.55
ATPAF1-201ENST00000329231 AGAP5A6NIR3 686 aa24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 CTAG2O75638 210 aa24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 PABPC4LP0CB38 370 aaKnown RBP24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 CD8BP10966 210 aa24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 PCYT1AP49585 367 aa24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 MVDP53602 400 aa24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 SESN3P58005 492 aa24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 GTF2IRD2BQ6EKJ0 949 aa24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 HMGN2P46Q86SG4 172 aa24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 GTF2IRD2Q86UP8 949 aa24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 CMIPQ8IY22 773 aa24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 ATP6V1C2Q8NEY4 427 aa24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 LINC01560Q8TB33 94 aa24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 GTF2H4Q92759 462 aa24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 CPNE4Q96A23 557 aaPredicted RBP24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 EXOSC3Q9NQT5 275 aaKnown RBP24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 TMEM45AQ9NWC5 275 aa24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 THUMPD1Q9NXG2 353 aaKnown RBP24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 CALML5Q9NZT1 146 aa24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 PROCRQ9UNN8 238 aa24.74■■□□□ 1.55
ATPAF1-201ENST00000329231 CGAP01215 116 aa24.73■■□□□ 1.55
ATPAF1-201ENST00000329231 CTBP2P56545 445 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms