RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 PRAF2O60831 178 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 ADH1AP07327 375 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 SBK2P0C263 348 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 GPX2P18283 190 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 LUMP51884 338 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-201ENST00000328923 SEMG2Q02383 582 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 PRKCZQ05513 592 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 RSU1Q15404 277 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 INPP5JQ15735 1006 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-201ENST00000328923 PLEKHN1Q494U1 663 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-201ENST00000328923 HACD4Q5VWC8 232 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 CD200R1LQ6Q8B3 271 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 SBSNQ6UWP8 590 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 LRRTM1Q86UE6 522 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 SLC30A8Q8IWU4 369 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 UBAC2Q8NBM4 344 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 FAM71CQ8NEG0 241 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 MED8Q96G25 268 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 TRIB3Q96RU7 358 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 MESP1Q9BRJ9 268 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 CHST5Q9GZS9 411 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 ST3GAL5Q9UNP4 418 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 A0A1W2PRB8 838 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 MEIS3P2A8K0S8 358 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 GABRPO00591 440 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 RFXANKO14593 260 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 RRP8O43159 456 aaKnown RBP11.04□□□□□ -0.64
SHMT2-201ENST00000328923 SOX14O95416 240 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 CTSHP09668 335 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 UCHL1P09936 223 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 NPSP0C0P6 89 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 CPT2P23786 658 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 HMGCS1Q01581 520 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 CLN3Q13286 438 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 SGCGQ13326 291 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 MPPED2Q15777 294 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 TPGS2Q68CL5 300 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 FBXO46Q6PJ61 603 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-201ENST00000328923 GLDNQ6ZMI3 551 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-201ENST00000328923 CPXM2Q8N436 756 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 AQP11Q8NBQ7 271 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 OR52B4Q8NGK2 314 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 SP7Q8TDD2 431 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-201ENST00000328923 UBTD2Q8WUN7 234 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 SLC39A7Q92504 469 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 C3orf49Q96BT1 292 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 LRFN5Q96NI6 719 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 TEAD3Q99594 435 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 SEC11CQ9BY50 192 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 LAT2Q9GZY6 243 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 ACKR4Q9NPB9 350 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 ASCL3Q9NQ33 180 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 SPG21Q9NZD8 308 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 ZDHHC8Q9ULC8 765 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 GOLT1BQ9Y3E0 138 aa11.04□□□□□ -0.64
SHMT2-201ENST00000328923 GREB1Q4ZG55 1949 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 IGLV3-10A0A075B6K4 115 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 TMEM229AB2RXF0 380 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 FAM227AF5H4B4 570 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 IMPA2O14732 288 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 FFAR2O15552 330 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 NARSO43776 548 aaKnown RBP11.03□□□□□ -0.64
SHMT2-201ENST00000328923 RAB36O95755 333 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 IFNA2P01563 188 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 RAC2P15153 192 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 CPN1P15169 458 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 IFNGR1P15260 489 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 S100A2P29034 98 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 RPL3P39023 403 aaKnown RBP11.03□□□□□ -0.64
SHMT2-201ENST00000328923 SP3Q02447 781 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 GLO1Q04760 184 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 KLF9Q13886 244 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-201ENST00000328923 NDUFAF6Q330K2 333 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 ARHGAP40Q5TG30 622 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 RGL4Q8IZJ4 473 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 ARIH2OSQ8N7S6 290 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 ZNF354BQ96LW1 612 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 CNTNAP3BQ96NU0 1288 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 ARHGAP9Q9BRR9 750 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 ALG8Q9BVK2 526 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 MEPEQ9NQ76 525 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-201ENST00000328923 STOX2Q9P2F5 926 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-201ENST00000328923 HEPACAM2A8MVW5 462 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 MANBAO00462 879 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 GASTP01350 101 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 OPN1SWP03999 348 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 ETFAP13804 333 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 MGMTP16455 207 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 TBXA2RP21731 343 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 PRPH2P23942 346 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 MAP3K8P41279 467 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 SNRPGP62308 76 aaKnown RBP11.03□□□□□ -0.64
SHMT2-201ENST00000328923 MTAPQ13126 283 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 ARSIQ5FYB1 569 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 KRBOX4Q5JUW0 171 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 RNLSQ5VYX0 342 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 NCEH1Q6PIU2 408 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 TMEM200AQ86VY9 491 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 TPRA1Q86W33 373 aa11.03□□□□□ -0.64
SHMT2-201ENST00000328923 TCEANCQ8N8B7 351 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms