RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 ISYNA1Q9NPH2 558 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 SEMA4GQ9NTN9 838 aa13.76□□□□□ -0.21
TCOF1-201ENST00000323668 OR5K4A6NMS3 321 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 TIMP1P01033 207 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 SNRPBP14678 240 aaKnown RBP13.75□□□□□ -0.21
TCOF1-201ENST00000323668 S1PR1P21453 382 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 POU4F3Q15319 338 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 TOMM20Q15388 145 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 C1orf94Q6P1W5 598 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 ZNF101Q8IZC7 436 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 OR2L3Q8NG85 312 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 CHST8Q9H2A9 424 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 POLMQ9NP87 494 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-201ENST00000323668 MLXQ9UH92 298 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 ICKQ9UPZ9 632 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 SLC9B1P1A6NJY1 282 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 C1QBP02746 253 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 CHRNB1P11230 501 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 ARFRP1Q13795 201 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 PTCHD1Q96NR3 888 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 OR2A14Q96R47 310 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 ZNF471Q9BX82 626 aaPredicted RBP13.75□□□□□ -0.21
TCOF1-201ENST00000323668 SLC25A18Q9H1K4 315 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 SPNS1Q9H2V7 528 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 PLEKHA6Q9Y2H5 1048 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 ACOT7O00154 380 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 UBL3O95164 117 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 SSTR2P30874 369 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 NTSR1P30989 418 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 BSGP35613 385 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 GZMMP51124 257 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 NRG3P56975 720 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 ERVFC1P60507 584 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 PRPS1P60891 318 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 MRPS10P82664 201 aaKnown RBP13.75□□□□□ -0.21
TCOF1-201ENST00000323668 PUDPQ08623 228 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 SPAG16Q8N0X2 631 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 MFSD9Q8NBP5 474 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 OR4M1Q8NGD0 313 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 OR5M3Q8NGP4 307 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 NECTIN4Q96NY8 510 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 BCL2L10Q9HD36 194 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 TESQ9UGI8 421 aaKnown RBP13.75□□□□□ -0.21
TCOF1-201ENST00000323668 A0A0G2JMP0 313 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 DISC1C4P0D8 188 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 TCRBP04435 133 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 GRK5P34947 590 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 OPRD1P41143 372 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 PDX1P52945 283 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 FABP5Q01469 135 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 EXOSC7Q15024 291 aaKnown RBP13.75□□□□□ -0.21
TCOF1-201ENST00000323668 RPE65Q16518 533 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 C7orf61Q8IZ16 206 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 OR4M2Q8NGB6 313 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 SFXN1Q9H9B4 322 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 IL21RQ9HBE5 538 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 V9GY05 133 aa13.75□□□□□ -0.21
TCOF1-201ENST00000323668 SOX1O00570 391 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-201ENST00000323668 KLF8O95600 359 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-201ENST00000323668 GPR75O95800 540 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 ALDOBP05062 364 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 EVX1P49640 407 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 IFITM3Q01628 133 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 CRMP1Q14194 572 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 ULK3Q6PHR2 472 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 BRIX1Q8TDN6 353 aaKnown RBP13.74□□□□□ -0.21
TCOF1-201ENST00000323668 DPYSL5Q9BPU6 564 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 COQ3Q9NZJ6 369 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 RCE1Q9Y256 329 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 ZNF20P17024 532 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 PLA2G15Q8NCC3 412 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 CNOT9Q92600 299 aaKnown RBP13.74□□□□□ -0.21
TCOF1-201ENST00000323668 RBBP6Q7Z6E9 1792 aaKnown RBP13.74□□□□□ -0.21
TCOF1-201ENST00000323668 TRAV18A0A075B6X5 111 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 SMLR1H3BR10 107 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 ARPC5O15511 151 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 GPRIN2O60269 458 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 S100A6P06703 90 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 BCL6P41182 706 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 PTH2RP49190 550 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 EIF5AP63241 154 aaKnown RBP13.74□□□□□ -0.21
TCOF1-201ENST00000323668 FOXK2Q01167 660 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 LRRC37A5PQ49AS3 106 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 TMEM52BQ4KMG9 183 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 FAM180AQ6UWF9 173 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 SLC29A4Q7RTT9 530 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 PDZD9Q8IXQ8 264 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 VN1R2Q8NFZ6 395 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 OR2AJ1Q8NGZ0 328 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 PPP1R14AQ96A00 147 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 TMEM43Q9BTV4 400 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 ACTR10Q9NZ32 417 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 BTG1P62324 171 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 DPTQ07507 201 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 SSX1Q16384 188 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 COL28A1Q2UY09 1125 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 WDR45BQ5MNZ6 344 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 METTL27Q8N6F8 245 aaPredicted RBP13.74□□□□□ -0.21
TCOF1-201ENST00000323668 OR4C15Q8NGM1 316 aa13.74□□□□□ -0.21
TCOF1-201ENST00000323668 CASTOR1Q8WTX7 329 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms