RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 GPR4P46093 362 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 RNF144AP50876 292 aaPredicted RBP16.37■□□□□ 0.21
RAB39A-201ENST00000320578 NRG3P56975 720 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 EFR3AQ14156 821 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 RNLSQ5VYX0 342 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 FAAH2Q6GMR7 532 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 WBP2NLQ6ICG8 309 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 LCN10Q6JVE6 187 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 PAPD4Q6PIY7 484 aaKnown RBP16.37■□□□□ 0.21
RAB39A-201ENST00000320578 KIRREL2Q6UWL6 708 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 TCEANCQ8N8B7 351 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 OR5L2Q8NGL0 311 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 TMEM163Q8TC26 289 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 ISOC1Q96CN7 298 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 BPIFA2Q96DR5 249 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 MYCBPQ99417 103 aaPredicted RBP16.37■□□□□ 0.21
RAB39A-201ENST00000320578 BCL7BQ9BQE9 202 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 TSSK6Q9BXA6 273 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 CDCA4Q9BXL8 241 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 STRADBQ9C0K7 418 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 SLC39A1Q9NY26 324 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 KMT2EQ8IZD2 1858 aa16.37■□□□□ 0.21
RAB39A-201ENST00000320578 USP34Q70CQ2 3546 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 SNTNA6NMZ2 147 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 GTPBP1O00178 669 aaKnown RBP16.36■□□□□ 0.21
RAB39A-201ENST00000320578 CDC42EP2O14613 210 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 ENTPD6O75354 484 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 PNMTP11086 282 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 ZNF28P17035 718 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 MAKP20794 623 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 MASP1P48740 699 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 IRF3Q14653 427 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 NCF4Q15080 339 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 CD226Q15762 336 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 SNAPC1Q16533 368 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 APOOLQ6UXV4 268 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 NAXDQ8IW45 347 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 CYP4Z2PQ8N1L4 340 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 IQCF1Q8N6M8 205 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 OR2T33Q8NG76 320 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 PHOSPHO1Q8TCT1 267 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 GRHL3Q8TE85 626 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 CRELD1Q96HD1 420 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 IL4I1Q96RQ9 567 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 CDC6Q99741 560 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 RHNO1Q9BSD3 238 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 MEPEQ9NQ76 525 aaPredicted RBP16.36■□□□□ 0.21
RAB39A-201ENST00000320578 TBC1D23Q9NUY8 699 aa16.36■□□□□ 0.21
RAB39A-201ENST00000320578 MRPS18AQ9NVS2 196 aaKnown RBP16.36■□□□□ 0.21
RAB39A-201ENST00000320578 C9J4A7 227 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 M0R129 80 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 PRKYO43930 277 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 ICOSLGO75144 302 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 PTP4A3O75365 173 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 TRMUO75648 421 aaKnown RBP16.35■□□□□ 0.21
RAB39A-201ENST00000320578 PPM1BO75688 479 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 ST3GAL4Q11206 333 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 PGGHGQ32M88 737 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 STX19Q8N4C7 294 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 PFN4Q8NHR9 129 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 C3orf49Q96BT1 292 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 NMD3Q96D46 503 aaKnown RBP16.35■□□□□ 0.21
RAB39A-201ENST00000320578 NRSN2Q9GZP1 204 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 C20orf141Q9NUB4 165 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 RYDENQ9NUL5 291 aaKnown RBP16.35■□□□□ 0.21
RAB39A-201ENST00000320578 IGHV3-20A0A0C4DH32 117 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 TLX2O43763 284 aaPredicted RBP16.35■□□□□ 0.21
RAB39A-201ENST00000320578 PRKNO60260 465 aaPredicted RBP16.35■□□□□ 0.21
RAB39A-201ENST00000320578 FADS1O60427 444 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 HCN1O60741 890 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 GRK5P34947 590 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 NUDT6P53370 316 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 GP2P55259 537 aaKnown RBP16.35■□□□□ 0.21
RAB39A-201ENST00000320578 SLC26A5P58743 744 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 GPR107Q5VW38 600 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 PLAG1Q6DJT9 500 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 FAM198BQ6UWH4 519 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 NUP54Q7Z3B4 507 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 ERI1Q8IV48 349 aaKnown RBP16.35■□□□□ 0.21
RAB39A-201ENST00000320578 MISPQ8IVT2 679 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 CADM2Q8N3J6 435 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 OR52L1Q8NGH7 329 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 RAB2BQ8WUD1 216 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 DPH1Q9BZG8 443 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 AMBNQ9NP70 447 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 GPR83Q9NYM4 423 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 BAIAP2Q9UQB8 552 aa16.35■□□□□ 0.21
RAB39A-201ENST00000320578 IRGMA1A4Y4 181 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 EFCAB9A8MZ26 197 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 ZFAND5O76080 213 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 INMTO95050 263 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 BMP7P18075 431 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 SLC9A3P48764 834 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 ST13P50502 369 aaKnown RBP16.34■□□□□ 0.21
RAB39A-201ENST00000320578 SYT14P1Q58G82 188 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 DCAF12Q5T6F0 453 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 CDCP2Q5VXM1 449 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 MEX3DQ86XN8 651 aaKnown RBP16.34■□□□□ 0.21
RAB39A-201ENST00000320578 PRR22Q8IZ63 422 aa16.34■□□□□ 0.21
RAB39A-201ENST00000320578 OR4Q3Q8NH05 313 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms