RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 TUBGCP3Q96CW5 907 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 SRXN1Q9BYN0 137 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 C12orf49Q9H741 205 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 TMEM185BQ9H7F4 350 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 GIN1Q9NXP7 522 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 SH3BP4Q9P0V3 963 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 KLHL13Q9P2N7 655 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 BAIAP2L1Q9UHR4 511 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 SNX8Q9Y5X2 465 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 ABCA1O95477 2261 aa12.65□□□□□ -0.38
RPP40-201ENST00000319533 FREM1Q5H8C1 2179 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 RNF223E7ERA6 249 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 ALOX5P09917 674 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 BCKDHAP12694 445 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 HPGDP15428 266 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 BGNP21810 368 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 IDUAP35475 653 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 SLC1A6P48664 564 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 DMTNQ08495 405 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 MAD2L1Q13257 205 aaPredicted RBP12.64□□□□□ -0.39
RPP40-201ENST00000319533 STX3Q13277 289 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 P2RY6Q15077 328 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 TAB1Q15750 504 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 HSP90B2PQ58FF3 399 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 TMEM201Q5SNT2 666 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 COX18Q8N8Q8 333 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 FBXO30Q8TB52 745 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 ABHD3Q8WU67 409 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 FBXW5Q969U6 566 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 MTERF3Q96E29 417 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 TRMT61AQ96FX7 289 aaKnown RBP12.64□□□□□ -0.39
RPP40-201ENST00000319533 C16orf58Q96GQ5 468 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 SH3YL1Q96HL8 342 aaPredicted RBP12.64□□□□□ -0.39
RPP40-201ENST00000319533 STACQ99469 402 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 BTBD2Q9BX70 525 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 REG4Q9BYZ8 158 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 GRIP2Q9C0E4 1043 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 ESRP2Q9H6T0 727 aaKnown RBP12.64□□□□□ -0.39
RPP40-201ENST00000319533 NGBQ9NPG2 151 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 TIGARQ9NQ88 270 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 DUSP22Q9NRW4 184 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 NKIRAS1Q9NYS0 192 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 ICAM5Q9UMF0 924 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.64□□□□□ -0.39
RPP40-201ENST00000319533 RAP2CQ9Y3L5 183 aa12.64□□□□□ -0.39
RPP40-201ENST00000319533 CUBNO60494 3623 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 TMEM120BA0PK00 339 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 GJE1A6NN92 205 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 ZNF195O14628 629 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 ITM2AO43736 263 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 PRKD3O94806 890 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 NTN1O95631 604 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 CD3EP07766 207 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 YES1P07947 543 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 RPL14P50914 215 aaKnown RBP12.63□□□□□ -0.39
RPP40-201ENST00000319533 SUMO3P55854 103 aaPredicted RBP12.63□□□□□ -0.39
RPP40-201ENST00000319533 POU6F2P78424 691 aaPredicted RBP12.63□□□□□ -0.39
RPP40-201ENST00000319533 ZNF117Q03924 483 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 FOXF1Q12946 379 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 VEZF1Q14119 521 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 MPP2Q14168 576 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 PDCD2Q16342 344 aaPredicted RBP12.63□□□□□ -0.39
RPP40-201ENST00000319533 ZNF672Q499Z4 452 aaPredicted RBP12.63□□□□□ -0.39
RPP40-201ENST00000319533 KLHL26Q53HC5 615 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 C6orf136Q5SQH8 315 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 TUSC5Q8IXB3 177 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 ZNF781Q8N8C0 355 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 PIWIL2Q8TC59 973 aaKnown RBP12.63□□□□□ -0.39
RPP40-201ENST00000319533 SMAP2Q8WU79 429 aaPredicted RBP12.63□□□□□ -0.39
RPP40-201ENST00000319533 FAM120BQ96EK7 910 aaKnown RBP12.63□□□□□ -0.39
RPP40-201ENST00000319533 REXO5Q96IC2 774 aaKnown RBP12.63□□□□□ -0.39
RPP40-201ENST00000319533 C3orf30Q96M34 536 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 C1orf50Q9BV19 199 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 HOXD1Q9GZZ0 328 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 PIGUQ9H490 435 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 COQ10BQ9H8M1 238 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 SIRT3Q9NTG7 399 aaPredicted RBP12.63□□□□□ -0.39
RPP40-201ENST00000319533 GIMAP2Q9UG22 337 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 MAGED1Q9Y5V3 778 aaPredicted RBP12.63□□□□□ -0.39
RPP40-201ENST00000319533 GPC6Q9Y625 555 aaPredicted RBP12.63□□□□□ -0.39
RPP40-201ENST00000319533 CADP27708 2225 aa12.63□□□□□ -0.39
RPP40-201ENST00000319533 CR1P17927 2039 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 ZNF814B7Z6K7 855 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 ETV2O00321 342 aaPredicted RBP12.62□□□□□ -0.39
RPP40-201ENST00000319533 SCAMP2O15127 329 aaKnown RBP12.62□□□□□ -0.39
RPP40-201ENST00000319533 OIP5O43482 229 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 TLX2O43763 284 aaPredicted RBP12.62□□□□□ -0.39
RPP40-201ENST00000319533 IL32P24001 234 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 SFTPDP35247 375 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 P2RX1P51575 399 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 SLC18A1P54219 525 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 GYS2P54840 703 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 ITGADQ13349 1161 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 TSC22D1Q15714 1073 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 PGGHGQ32M88 737 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 SLC25A53Q5H9E4 307 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 CCNJQ5T5M9 372 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 IL23RQ5VWK5 629 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 CBLN3Q6UW01 205 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 FCRLAQ7L513 359 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms