RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ORC5O43913 435 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 FGF17O60258 216 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 OR5F1O95221 314 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 EPPINO95925 133 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 IFNA14P01570 189 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 FHP07954 510 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 CYP4B1P13584 511 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 MPIP34949 423 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 RPS19P39019 145 aaKnown RBP12.12□□□□□ -0.47
CPNE1-201ENST00000317677 XCR1P46094 333 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 XKP51811 444 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 SHC2P98077 582 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 POU4F3Q15319 338 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 SHBQ15464 509 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 PRTGQ2VWP7 1150 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 C14orf28Q4W4Y0 310 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 MANEAQ5SRI9 462 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 FAHD1Q6P587 224 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 WDR53Q7Z5U6 358 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-201ENST00000317677 HMGN2P46Q86SG4 172 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 MCATQ8IVS2 390 aaKnown RBP12.12□□□□□ -0.47
CPNE1-201ENST00000317677 NUP43Q8NFH3 380 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 ZNF431Q8TF32 576 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-201ENST00000317677 WBP1Q96G27 269 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 EPYCQ99645 322 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 TREX2Q9BQ50 279 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-201ENST00000317677 TAPBPLQ9BX59 468 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 ASPNQ9BXN1 380 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 GABARAPL3Q9BY60 117 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 REEP1Q9H902 201 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 RASSF1Q9NS23 344 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 MCUBQ9NWR8 336 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 TRPC4Q9UBN4 977 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 UBQLN2Q9UHD9 624 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 ENOPH1Q9UHY7 261 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 KIF25Q9UIL4 384 aa12.12□□□□□ -0.47
CPNE1-201ENST00000317677 C5orf58C9J3I9 102 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 ABCD4O14678 606 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 LDB3O75112 727 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 EPHA2P29317 976 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 LIMS1P48059 325 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 FNTBP49356 437 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 KHKP50053 298 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 RAB14P61106 215 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 BTG1P62324 171 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 HOXC5Q00444 222 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 SRSF5Q13243 272 aaKnown RBP12.11□□□□□ -0.47
CPNE1-201ENST00000317677 ZMYND11Q15326 602 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 MICAQ29983 383 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 C6orf132Q5T0Z8 1188 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 NKAIN2Q5VXU1 208 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 CFAP77Q6ZQR2 320 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 USP53Q70EK8 1073 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 SLC25A45Q8N413 288 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 OR56A1Q8NGH5 318 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 OR9A4Q8NGU2 314 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 GEMIN6Q8WXD5 167 aaKnown RBP12.11□□□□□ -0.47
CPNE1-201ENST00000317677 UBE2FQ969M7 185 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 OR7D2Q96RA2 312 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 SLC38A3Q99624 504 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 FOLH1BQ9HBA9 442 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 EMC7Q9NPA0 242 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 NTMQ9P121 344 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 P2RX2Q9UBL9 471 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 PCDHGB7Q9Y5F8 929 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 PCDHGA6Q9Y5G7 932 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 OTOGLQ3ZCN5 2332 aa12.11□□□□□ -0.47
CPNE1-201ENST00000317677 IGHV5-51A0A0C4DH38 117 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 KRBOX1C9JBD0 128 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 FFAR1O14842 300 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 RDH16O75452 317 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 ZIC2O95409 532 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-201ENST00000317677 MYF5P13349 255 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 TDGF1P13385 188 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 CPMP14384 443 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 ARSBP15848 533 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 KCNJ5P48544 419 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 DAB2P98082 770 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 RUNX1T1Q06455 604 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 FHL5Q5TD97 284 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 FAM131AQ6UXB0 335 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 HSDL2Q6YN16 418 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 OVCH2Q7RTZ1 564 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 RBM45Q8IUH3 476 aaKnown RBP12.1□□□□□ -0.47
CPNE1-201ENST00000317677 LAX1Q8IWV1 398 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 LRRC25Q8N386 305 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-201ENST00000317677 OR4K14Q8NGD5 310 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 MOAP1Q96BY2 351 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 GSX2Q9BZM3 304 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 EQTNQ9NQ60 294 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 KRT84Q9NSB2 600 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 ARID1BQ8NFD5 2236 aaPredicted RBP12.1□□□□□ -0.47
CPNE1-201ENST00000317677 ASXL3Q9C0F0 2248 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 FABP12A6NFH5 140 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 FABP7O15540 132 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 FOXS1O43638 330 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 GMDSO60547 372 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 GPX5O75715 221 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 TGM6O95932 706 aa12.1□□□□□ -0.47
CPNE1-201ENST00000317677 PTHP01270 115 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms