RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 PTP4A3O75365 173 aa19.03■□□□□ 0.64
TTC39C-202ENST00000317571 CCNKO75909 580 aa19.03■□□□□ 0.64
TTC39C-202ENST00000317571 ATP6V1E1P36543 226 aa19.03■□□□□ 0.64
TTC39C-202ENST00000317571 BTG2P78543 158 aa19.03■□□□□ 0.64
TTC39C-202ENST00000317571 TAB1Q15750 504 aa19.03■□□□□ 0.64
TTC39C-202ENST00000317571 PRPF38BQ5VTL8 546 aaKnown RBP19.03■□□□□ 0.64
TTC39C-202ENST00000317571 FAM131AQ6UXB0 335 aa19.03■□□□□ 0.64
TTC39C-202ENST00000317571 MARCH9Q86YJ5 346 aa19.03■□□□□ 0.64
TTC39C-202ENST00000317571 SLC37A3Q8NCC5 494 aa19.03■□□□□ 0.64
TTC39C-202ENST00000317571 OR52L1Q8NGH7 329 aa19.03■□□□□ 0.64
TTC39C-202ENST00000317571 ART5Q96L15 291 aa19.03■□□□□ 0.64
TTC39C-202ENST00000317571 VSTM2LQ96N03 204 aa19.03■□□□□ 0.64
TTC39C-202ENST00000317571 ZNF426Q9BUY5 554 aa19.03■□□□□ 0.64
TTC39C-202ENST00000317571 H2AFY2Q9P0M6 372 aaPredicted RBP19.03■□□□□ 0.64
TTC39C-202ENST00000317571 LINC00854A0A1B0GVQ3 168 aa19.02■□□□□ 0.64
TTC39C-202ENST00000317571 AKAP8O43823 692 aaKnown RBP19.02■□□□□ 0.64
TTC39C-202ENST00000317571 REM1O75628 298 aa19.02■□□□□ 0.64
TTC39C-202ENST00000317571 SAGP10523 405 aaPredicted RBP19.02■□□□□ 0.64
TTC39C-202ENST00000317571 CTBP2P56545 445 aa19.02■□□□□ 0.64
TTC39C-202ENST00000317571 OR2B6P58173 313 aa19.02■□□□□ 0.64
TTC39C-202ENST00000317571 NNATQ16517 81 aa19.02■□□□□ 0.64
TTC39C-202ENST00000317571 DNAJA4Q8WW22 397 aaPredicted RBP19.02■□□□□ 0.64
TTC39C-202ENST00000317571 CAPSLQ8WWF8 208 aa19.02■□□□□ 0.64
TTC39C-202ENST00000317571 ZNF486Q96H40 463 aaPredicted RBP19.02■□□□□ 0.64
TTC39C-202ENST00000317571 SPACA7Q96KW9 195 aa19.02■□□□□ 0.64
TTC39C-202ENST00000317571 MAP3K3Q99759 626 aa19.02■□□□□ 0.64
TTC39C-202ENST00000317571 IFT27Q9BW83 186 aa19.02■□□□□ 0.64
TTC39C-202ENST00000317571 FN3KQ9H479 309 aa19.02■□□□□ 0.64
TTC39C-202ENST00000317571 NEK6Q9HC98 313 aa19.02■□□□□ 0.64
TTC39C-202ENST00000317571 CMC2Q9NRP2 79 aa19.02■□□□□ 0.64
TTC39C-202ENST00000317571 MED31Q9Y3C7 131 aa19.02■□□□□ 0.64
TTC39C-202ENST00000317571 THADAQ6YHU6 1953 aa19.02■□□□□ 0.64
TTC39C-202ENST00000317571 A0A1W2PPC4 97 aa19.02■□□□□ 0.63
TTC39C-202ENST00000317571 HRO43593 1189 aa19.02■□□□□ 0.63
TTC39C-202ENST00000317571 CSF3P09919 207 aa19.02■□□□□ 0.63
TTC39C-202ENST00000317571 NDUFAF6Q330K2 333 aa19.02■□□□□ 0.63
TTC39C-202ENST00000317571 RSBN1Q5VWQ0 802 aaPredicted RBP19.02■□□□□ 0.63
TTC39C-202ENST00000317571 ZNF613Q6PF04 617 aa19.02■□□□□ 0.63
TTC39C-202ENST00000317571 UTS2BQ765I0 119 aa19.02■□□□□ 0.63
TTC39C-202ENST00000317571 GID4Q8IVV7 300 aa19.02■□□□□ 0.63
TTC39C-202ENST00000317571 ATP6V1C2Q8NEY4 427 aa19.02■□□□□ 0.63
TTC39C-202ENST00000317571 DIRAS2Q96HU8 199 aa19.02■□□□□ 0.63
TTC39C-202ENST00000317571 RNF32Q9H0A6 362 aa19.02■□□□□ 0.63
TTC39C-202ENST00000317571 VCANP13611 3396 aa19.02■□□□□ 0.63
TTC39C-202ENST00000317571 SPEGQ15772 3267 aa19.02■□□□□ 0.63
TTC39C-202ENST00000317571 PCDH15Q96QU1 1955 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 CHP2O43745 196 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 WNT1P04628 370 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 BMP7P18075 431 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 KLHL12Q53G59 568 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 CCDC92Q53HC0 331 aaPredicted RBP19.01■□□□□ 0.63
TTC39C-202ENST00000317571 PARGQ86W56 976 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 NR2C2APQ86WQ0 139 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 DEFB119Q8N690 84 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 CYB561A3Q8NBI2 242 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 GALNT6Q8NCL4 622 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 TMCO6Q96DC7 493 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 SENP5Q96HI0 755 aaPredicted RBP19.01■□□□□ 0.63
TTC39C-202ENST00000317571 ZNF559Q9BR84 538 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 ALG8Q9BVK2 526 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 TPSD1Q9BZJ3 242 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 POLE3Q9NRF9 147 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 GSTK1Q9Y2Q3 226 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 LAMA1P25391 3075 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 CASKO14936 926 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 MRPL3P09001 348 aaKnown RBP19.01■□□□□ 0.63
TTC39C-202ENST00000317571 BMP8BP34820 402 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 COPZ1P61923 177 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 ARMC6Q6NXE6 501 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 BMP8AQ7Z5Y6 402 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 METTL27Q8N6F8 245 aaPredicted RBP19.01■□□□□ 0.63
TTC39C-202ENST00000317571 ACBD7Q8N6N7 88 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 RCBTB1Q8NDN9 531 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 RIT1Q92963 219 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 TNFRSF13CQ96RJ3 184 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 ATF6BQ99941 703 aa19.01■□□□□ 0.63
TTC39C-202ENST00000317571 TMEM184BQ9Y519 407 aaPredicted RBP19.01■□□□□ 0.63
TTC39C-202ENST00000317571 HEATR5AQ86XA9 2040 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 E9PI62 339 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 POLR1CO15160 346 aaPredicted RBP19■□□□□ 0.63
TTC39C-202ENST00000317571 PRKNO60260 465 aaPredicted RBP19■□□□□ 0.63
TTC39C-202ENST00000317571 PPP1R3DO95685 299 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 SLC2A5P22732 501 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 HTR3AP46098 478 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 CRMP1Q14194 572 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 C1QTNF12Q5T7M4 302 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 DDI2Q5TDH0 399 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 UBQLNLQ8IYU4 475 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 NEIL3Q8TAT5 605 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 SETD6Q8TBK2 473 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 PPIL3Q9H2H8 161 aaKnown RBP19■□□□□ 0.63
TTC39C-202ENST00000317571 MARCH7Q9H992 704 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 TMEM27Q9HBJ8 222 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 MCCC2Q9HCC0 563 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 COMMD3Q9UBI1 195 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 ZMIZ1Q9ULJ6 1067 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 FABP12A6NFH5 140 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 NPIPB9F8W1W9 429 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 GPR50Q13585 617 aa19■□□□□ 0.63
TTC39C-202ENST00000317571 GAS6Q14393 721 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms