RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 OR2L3Q8NG85 312 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 HAVCR2Q8TDQ0 301 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 PMM1Q92871 262 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 MRPL48Q96GC5 212 aaKnown RBP12.85□□□□□ -0.35
MKS1-201ENST00000313863 ERMAPQ96PL5 475 aaPredicted RBP12.85□□□□□ -0.35
MKS1-201ENST00000313863 PRSS27Q9BQR3 290 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 LGR4Q9BXB1 951 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 PRDM9Q9NQV7 894 aa12.85□□□□□ -0.35
MKS1-201ENST00000313863 PHPT1Q9NRX4 125 aaPredicted RBP12.85□□□□□ -0.35
MKS1-201ENST00000313863 SNRNP200O75643 2136 aaKnown RBP12.84□□□□□ -0.35
MKS1-201ENST00000313863 TBC1D3EA0A087X179 549 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 OR5K3A6NET4 321 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 REM1O75628 298 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 ECDO95905 644 aaPredicted RBP12.84□□□□□ -0.35
MKS1-201ENST00000313863 STATHP02808 62 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 LAMP2P13473 410 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 AP3S2P59780 193 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 SRP54P61011 504 aaKnown RBP12.84□□□□□ -0.35
MKS1-201ENST00000313863 ACTA2P62736 377 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 ACTG2P63267 376 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 SNTB2Q13425 540 aaKnown RBP12.84□□□□□ -0.35
MKS1-201ENST00000313863 OR1Q1Q15612 314 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 LTB4RQ15722 352 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 GRK1Q15835 563 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 TCEAL5Q5H9L2 206 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 OVCH1Q7RTY7 1134 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 ZNF619Q8N2I2 560 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 SLC16A11Q8NCK7 471 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 SMPDL3BQ92485 455 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 HSD17B8Q92506 261 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 PHYHIPQ92561 330 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 LRFN5Q96NI6 719 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 ZCCHC4Q9H5U6 513 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 HEXA-AS1Q9H8Q6 139 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 SPATA2Q9UM82 520 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 MED31Q9Y3C7 131 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 LOC105369274A0A096LPK9 316 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 A0A1B0GTQ1 180 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 IGLON5A6NGN9 336 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 E9PI62 339 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 ZNF749O43361 778 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 PRICKLE3O43900 615 aaPredicted RBP12.84□□□□□ -0.35
MKS1-201ENST00000313863 CD1AP06126 327 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 CD3GP09693 182 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 TYRP1P17643 537 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 POLR2CP19387 275 aaPredicted RBP12.84□□□□□ -0.35
MKS1-201ENST00000313863 TBXA2RP21731 343 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 ZNF81P51508 661 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 GBX2P52951 348 aaPredicted RBP12.84□□□□□ -0.35
MKS1-201ENST00000313863 E2F1Q01094 437 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 SLC25A35Q3KQZ1 300 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 AMZ1Q400G9 498 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 UBE2NLQ5JXB2 153 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 FAM27D1Q5T7N8 215 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 FAM20CQ8IXL6 584 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 OR4N4Q8N0Y3 316 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 PIAS4Q8N2W9 510 aaPredicted RBP12.84□□□□□ -0.35
MKS1-201ENST00000313863 OR2L13Q8N349 312 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 EID2Q8N6I1 236 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 OR4K14Q8NGD5 310 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 SMIM4Q8WVI0 70 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 GIMAP1Q8WWP7 306 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 BPIFA2Q96DR5 249 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 PGLYRP3Q96LB9 341 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 ZFP3Q96NJ6 502 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 MACROD1Q9BQ69 325 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 OR51V1Q9H2C8 321 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 ADGRL4Q9HBW9 690 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 BRD7Q9NPI1 651 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 DLL4Q9NR61 685 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 CREBZFQ9NS37 354 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 CLDND1Q9NY35 253 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 APOBEC3BQ9UH17 382 aaKnown RBP12.84□□□□□ -0.35
MKS1-201ENST00000313863 MAB21L2Q9Y586 359 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 HEBP2Q9Y5Z4 205 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 NPTNQ9Y639 398 aa12.84□□□□□ -0.35
MKS1-201ENST00000313863 ZC3H12DA2A288 527 aaKnown RBP12.83□□□□□ -0.36
MKS1-201ENST00000313863 CDHR4A6H8M9 788 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 TRABD2BA6NFA1 517 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 I3L521 148 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 RNGTTO60942 597 aaKnown RBP12.83□□□□□ -0.36
MKS1-201ENST00000313863 PEX14O75381 377 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 EPXP11678 715 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 NID1P14543 1247 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 MAKP20794 623 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 RPS4Y1P22090 263 aaKnown RBP12.83□□□□□ -0.36
MKS1-201ENST00000313863 PRKACBP22694 351 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 LCN1P31025 176 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 TLX1P31314 330 aaPredicted RBP12.83□□□□□ -0.36
MKS1-201ENST00000313863 BTN3A2P78410 334 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 DGCR2P98153 550 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 TNFRSF17Q02223 184 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 ZNF85Q03923 595 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 CAMK2DQ13557 499 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 FGFBP1Q14512 234 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 AGERQ15109 404 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 TJAP1Q5JTD0 557 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 PLPP4Q5VZY2 271 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 ARHGAP11AQ6P4F7 1023 aa12.83□□□□□ -0.36
MKS1-201ENST00000313863 FAM111BQ6SJ93 734 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms