RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ING1Q9UK53 422 aaPredicted RBP13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 WDR45Q9Y484 360 aa13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 GPC6Q9Y625 555 aaPredicted RBP13.07□□□□□ -0.32
PPP1CA-201ENST00000312989 DSPPQ9NZW4 1301 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 NUP214P35658 2090 aaPredicted RBP13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 ENO4A6NNW6 628 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 SIAH2O43255 324 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 DIAPH2O60879 1101 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 AGR2O95994 175 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 IL6P05231 212 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 ZCCHC18P0CG32 403 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 EPXP11678 715 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 KLK2P20151 261 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 IDH3AP50213 366 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 RPS3AP61247 264 aaKnown RBP13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 EEF1A1P68104 462 aaKnown RBP13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 ZNF239Q16600 458 aaKnown RBP13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 EEF1A1P5Q5VTE0 462 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 NXNQ6DKJ4 435 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 DNAJC14Q6Y2X3 702 aaPredicted RBP13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 MSANTD1Q6ZTZ1 278 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 C16orf62Q7Z3J2 963 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 P4HA3Q7Z4N8 544 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 ZNF619Q8N2I2 560 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 ZNF614Q8N883 585 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 RNF128Q8TEB7 428 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 GTF2H4Q92759 462 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 MRGPRX4Q96LA9 322 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 RSPO3Q9BXY4 272 aaPredicted RBP13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 CLEC4AQ9UMR7 237 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 TESMINQ9Y4I5 508 aa13.06□□□□□ -0.32
PPP1CA-201ENST00000312989 HIVEP1P15822 2718 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 MED12LQ86YW9 2145 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 SPG11Q96JI7 2443 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 TUBAL3A6NHL2 446 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 AGAP5A6NIR3 686 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 H3BNH8 94 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 UBDO15205 165 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 CSTAP01040 98 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 FCGR2AP12318 317 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 DNAJA1P31689 397 aaKnown RBP13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 LRRC74AQ0VAA2 488 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 TIGD2Q4W5G0 525 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 HBMQ6B0K9 141 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 ZNF621Q6ZSS3 439 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 TMEM200AQ86VY9 491 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 KIF18BQ86Y91 864 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 MSRB3Q8IXL7 192 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 CNEP1R1Q8N9A8 125 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 ZNF610Q8N9Z0 462 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 PNPT1Q8TCS8 783 aaKnown RBP13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 AURKBQ96GD4 344 aaPredicted RBP13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 GMPPAQ96IJ6 420 aaPredicted RBP13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 TRNT1Q96Q11 434 aaKnown RBP13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 THUMPD3Q9BV44 507 aaKnown RBP13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 PAIP1Q9H074 479 aaKnown RBP13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 CHST2Q9Y4C5 530 aa13.05□□□□□ -0.32
PPP1CA-201ENST00000312989 HMGB1P1B2RPK0 211 aaPredicted RBP13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 GTPBP1O00178 669 aaKnown RBP13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 RFXANKO14593 260 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 TGDSO95455 350 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 HRGP04196 525 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 UBTFL6P0CB48 400 aaPredicted RBP13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 SFTPDP35247 375 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 CHI3L1P36222 383 aaPredicted RBP13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 SESN3P58005 492 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 SELENBP1Q13228 472 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 CBFBQ13951 182 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 LRRC74BQ6ZQY2 392 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 CHMP1BQ7LBR1 199 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 HDXQ7Z353 690 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 CDC20BQ86Y33 519 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 C10orf111Q8N326 155 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 RFWD2Q8NHY2 731 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 CKAP2Q8WWK9 683 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 CNOT9Q92600 299 aaKnown RBP13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 OSTF1Q92882 214 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 LRRC46Q96FV0 321 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 DACH2Q96NX9 599 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 ZBTB18Q99592 522 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 CCDC106Q9BWC9 280 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 CLEC4MQ9H2X3 399 aaPredicted RBP13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 ZNF385DQ9H6B1 395 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 TCF7L2Q9NQB0 619 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 EXOSC3Q9NQT5 275 aaKnown RBP13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 PLSCR4Q9NRQ2 329 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 PAQR5Q9NXK6 330 aaPredicted RBP13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 DNAJB12Q9NXW2 375 aaKnown RBP13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 SLC25A37Q9NYZ2 338 aa13.04□□□□□ -0.32
PPP1CA-201ENST00000312989 TRBV5-3A0A0A0MS03 114 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 FAM234BA2RU67 622 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 SMNDC1O75940 238 aaKnown RBP eCLIP13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 NUDT14O95848 222 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 TFPTP0C1Z6 253 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 ETFAP13804 333 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 LOXP28300 417 aaPredicted RBP13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 AGTR1P30556 359 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 CPOXP36551 454 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 CD79BP40259 229 aa13.03□□□□□ -0.32
PPP1CA-201ENST00000312989 POLR2JP52435 117 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms