RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 MPC1LP0DKB6 136 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 HTR1FP30939 366 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 AKR1C2P52895 323 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 AKR1C1Q04828 323 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 SLBPQ14493 270 aaKnown RBP eCLIP16.78■□□□□ 0.28
SPSB4-201ENST00000310546 FAM69AQ5T7M9 428 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 TPRA1Q86W33 373 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 SLC39A11Q8N1S5 342 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 TMEM99Q8N816 258 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 BBS10Q8TAM1 723 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 EXOGQ9Y2C4 368 aaKnown RBP16.78■□□□□ 0.28
SPSB4-201ENST00000310546 PCDHGA5Q9Y5G8 931 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 HIDE1A8MVS5 230 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 FMO6PO60774 539 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 PRAMEF2O60811 474 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 FGF18O76093 207 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 KLHL18O94889 574 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 OR2A4O95047 310 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 ATP1B2P14415 290 aaPredicted RBP16.78■□□□□ 0.28
SPSB4-201ENST00000310546 H2BFSP57053 126 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 PLPP4Q5VZY2 271 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 SERPINA12Q8IW75 414 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 LRRC56Q8IYG6 542 aaPredicted RBP16.78■□□□□ 0.28
SPSB4-201ENST00000310546 OR52I2Q8NH67 350 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 C2orf15Q8WU43 125 aaKnown RBP16.78■□□□□ 0.28
SPSB4-201ENST00000310546 MYLIPQ8WY64 445 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 WNT2BQ93097 391 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 OR2A7Q96R45 310 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 ZNF334Q9HCZ1 680 aaPredicted RBP16.78■□□□□ 0.28
SPSB4-201ENST00000310546 MYNNQ9NPC7 610 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 HINT3Q9NQE9 182 aaKnown RBP16.78■□□□□ 0.28
SPSB4-201ENST00000310546 HCFC1R1Q9NWW0 138 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 SPG21Q9NZD8 308 aa16.78■□□□□ 0.28
SPSB4-201ENST00000310546 SLC16A5O15375 505 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 B4GALT2O60909 372 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 EFEMP2O95967 443 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 ZNF806P0C7X5 589 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 CPN1P15169 458 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 GPR4P46093 362 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 PREPP48147 710 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 TAS2R41P59536 307 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 STXBP1P61764 594 aaKnown RBP16.77■□□□□ 0.28
SPSB4-201ENST00000310546 AP1S1P61966 158 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 UBXN2BQ14CS0 331 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 ACSM3Q53FZ2 586 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 COL13A1Q5TAT6 717 aaPredicted RBP16.77■□□□□ 0.28
SPSB4-201ENST00000310546 PLBD1Q6P4A8 553 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 CRTC1Q6UUV9 634 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 APCDD1Q8J025 514 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 FAM98AQ8NCA5 519 aaKnown RBP16.77■□□□□ 0.28
SPSB4-201ENST00000310546 SMAP2Q8WU79 429 aaPredicted RBP16.77■□□□□ 0.28
SPSB4-201ENST00000310546 QRSL1Q9H0R6 528 aaKnown RBP16.77■□□□□ 0.28
SPSB4-201ENST00000310546 ANKRD19PQ9H560 264 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 PRDM9Q9NQV7 894 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 KLHL42Q9P2K6 505 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 OPN4Q9UHM6 478 aa16.77■□□□□ 0.28
SPSB4-201ENST00000310546 OR2W5A6NFC9 320 aa16.77■□□□□ 0.27
SPSB4-201ENST00000310546 SSX5O60225 188 aa16.77■□□□□ 0.27
SPSB4-201ENST00000310546 REM1O75628 298 aa16.77■□□□□ 0.27
SPSB4-201ENST00000310546 PTHLHP12272 177 aa16.77■□□□□ 0.27
SPSB4-201ENST00000310546 LINC00303Q3SY05 128 aa16.77■□□□□ 0.27
SPSB4-201ENST00000310546 TMEM17Q86X19 198 aa16.77■□□□□ 0.27
SPSB4-201ENST00000310546 OR6V1Q8N148 313 aa16.77■□□□□ 0.27
SPSB4-201ENST00000310546 LINC00471Q8N535 108 aa16.77■□□□□ 0.27
SPSB4-201ENST00000310546 LILRA3Q8N6C8 439 aaPredicted RBP16.77■□□□□ 0.27
SPSB4-201ENST00000310546 KLK6Q92876 244 aa16.77■□□□□ 0.27
SPSB4-201ENST00000310546 TEX12Q9BXU0 123 aa16.77■□□□□ 0.27
SPSB4-201ENST00000310546 GPN1Q9HCN4 374 aaPredicted RBP16.77■□□□□ 0.27
SPSB4-201ENST00000310546 SLC22A11Q9NSA0 550 aa16.77■□□□□ 0.27
SPSB4-201ENST00000310546 SH2B3Q9UQQ2 575 aa16.77■□□□□ 0.27
SPSB4-201ENST00000310546 PQLC2LA1A4F0 135 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 PRAMEF27A3QJZ7 478 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 CCL16O15467 120 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 SERPINA3P01011 423 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 ZNF35P13682 527 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 ACADLP28330 430 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 IMPA1P29218 277 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 ZNF528Q3MIS6 628 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 PIP5KL1Q5T9C9 394 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 SLCO4C1Q6ZQN7 724 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 SLC16A13Q7RTY0 426 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 MRGPREQ86SM8 312 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 C12orf45Q8N5I9 185 aaPredicted RBP16.76■□□□□ 0.27
SPSB4-201ENST00000310546 MFFQ9GZY8 342 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 MRPL17Q9NRX2 175 aaKnown RBP16.76■□□□□ 0.27
SPSB4-201ENST00000310546 OR10H1Q9Y4A9 318 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 CXCL14O95715 111 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 CKMP06732 381 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 SPP1P10451 314 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 ACHEP22303 614 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 SMAD3P84022 425 aaKnown RBP16.76■□□□□ 0.27
SPSB4-201ENST00000310546 C2orf68Q2NKX9 166 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 PLEKHS1Q5SXH7 462 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 PRAMEF13Q5VWM6 474 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 ZDHHC20Q5W0Z9 365 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 HEPHL1Q6MZM0 1159 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 TMEM185AQ8NFB2 350 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 THEM6Q8WUY1 208 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 SLC25A28Q96A46 364 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 PRRC1Q96M27 445 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms