RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ADAM11O75078 769 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 CBX7O95931 251 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 THBS1P07996 1170 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 HCCSP53701 268 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 FOXK2Q01167 660 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 FHL5Q5TD97 284 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 CNIH2Q6PI25 160 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 ZNF322Q6U7Q0 402 aaPredicted RBP10.68□□□□□ -0.7
PTPN2-201ENST00000309660 NCCRP1Q6ZVX7 275 aaPredicted RBP10.68□□□□□ -0.7
PTPN2-201ENST00000309660 MCATQ8IVS2 390 aaKnown RBP10.68□□□□□ -0.7
PTPN2-201ENST00000309660 FAM98AQ8NCA5 519 aaKnown RBP10.68□□□□□ -0.7
PTPN2-201ENST00000309660 ANKRD9Q96BM1 317 aaPredicted RBP10.68□□□□□ -0.7
PTPN2-201ENST00000309660 MMABQ96EY8 250 aaPredicted RBP10.68□□□□□ -0.7
PTPN2-201ENST00000309660 MEPEQ9NQ76 525 aaPredicted RBP10.68□□□□□ -0.7
PTPN2-201ENST00000309660 RPS6KB2Q9UBS0 482 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 A8MUA0 341 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 SDC3O75056 442 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 RCBTB2O95199 551 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 RPL4P36578 427 aaKnown RBP10.68□□□□□ -0.7
PTPN2-201ENST00000309660 FZD2Q14332 565 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 TRIQKQ629K1 86 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 OR4K13Q8NH42 304 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 GPBAR1Q8TDU6 330 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 KLHDC7BQ96G42 594 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 KIR2DS5A0A0G2JLQ3 304 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 A0A0G2JNG1 304 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 SPTY2D1-AS1A0A0U1RR47 76 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 KIR2DS3K7RE56 304 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 KLF4O43474 513 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 BRINP1O60477 761 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 FAM53BQ14153 422 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 KIR2DS5Q14953 304 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 P2RY14Q15391 338 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 RNLSQ5VYX0 342 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 NIPAL3Q6P499 406 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 RAB43Q86YS6 212 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 ARL14Q8N4G2 192 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 CLDN22Q8N7P3 220 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 SDR9C7Q8NEX9 313 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 TXNDC15Q96J42 360 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 NTMQ9P121 344 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 ERVK-19Q9WJR5 959 aa10.68□□□□□ -0.7
PTPN2-201ENST00000309660 SIRT4Q9Y6E7 314 aaPredicted RBP10.68□□□□□ -0.7
PTPN2-201ENST00000309660 STK25O00506 426 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 NAA10P41227 235 aaPredicted RBP10.67□□□□□ -0.7
PTPN2-201ENST00000309660 UBE2IP63279 158 aaKnown RBP10.67□□□□□ -0.7
PTPN2-201ENST00000309660 PSG6Q00889 435 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 MEPCEQ7L2J0 689 aaKnown RBP10.67□□□□□ -0.7
PTPN2-201ENST00000309660 MRGPREQ86SM8 312 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 C10orf53Q8N6V4 93 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 C19orf18Q8NEA5 215 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 IL17RDQ8NFM7 739 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 ENKURQ8TC29 256 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 ERMAPQ96PL5 475 aaPredicted RBP10.67□□□□□ -0.7
PTPN2-201ENST00000309660 FLRT3Q9NZU0 649 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 GRIP1Q9Y3R0 1128 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 E9PI62 339 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 DYRK3O43781 588 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 CSF3P09919 207 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 SLC2A2P11168 524 aaPredicted RBP10.67□□□□□ -0.7
PTPN2-201ENST00000309660 TBXA2RP21731 343 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 RAB38P57729 211 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 TMEM44Q2T9K0 475 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 SNAP47Q5SQN1 464 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 GLCCI1Q86VQ1 547 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 GID4Q8IVV7 300 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 PRSS58Q8IYP2 241 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 LRRC17Q8N6Y2 441 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 DNAJC5GQ8N7S2 189 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 C19orf47Q8N9M1 422 aaKnown RBP10.67□□□□□ -0.7
PTPN2-201ENST00000309660 OR52E2Q8NGJ4 325 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 LMX1AQ8TE12 382 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 ZMYND19Q96E35 227 aaPredicted RBP10.67□□□□□ -0.7
PTPN2-201ENST00000309660 TGM7Q96PF1 710 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 SLC38A3Q99624 504 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 C11orf54Q9H0W9 315 aaPredicted RBP10.67□□□□□ -0.7
PTPN2-201ENST00000309660 FN3KQ9H479 309 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 FOLH1BQ9HBA9 442 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 MRPS18AQ9NVS2 196 aaKnown RBP10.67□□□□□ -0.7
PTPN2-201ENST00000309660 CCDC182A6NF36 153 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 IGKV1D-16P01601 117 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 ALAS2P22557 587 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 PYCR1P32322 319 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 RFX2P48378 723 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 MGAT2Q10469 447 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 RNASE12Q5GAN4 147 aaKnown RBP10.67□□□□□ -0.7
PTPN2-201ENST00000309660 AGAP6Q5VW22 663 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 KIAA0895LQ68EN5 471 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 RNF44Q7L0R7 432 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 Q8N402 240 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 PTP4A1Q93096 173 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 EFHD2Q96C19 240 aaPredicted RBP10.67□□□□□ -0.7
PTPN2-201ENST00000309660 C4orf36Q96KX1 117 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 AGAP4Q96P64 663 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 DGAT2Q96PD7 388 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 ASXL3Q9C0F0 2248 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 SIAEQ9HAT2 523 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 PRTFDC1Q9NRG1 225 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 LRIT1Q9P2V4 623 aa10.67□□□□□ -0.7
PTPN2-201ENST00000309660 SIGLEC7Q9Y286 467 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms