RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 NRSN2Q9GZP1 204 aa19.54■□□□□ 0.72
ATG4D-201ENST00000309469 WWTR1Q9GZV5 400 aa19.54■□□□□ 0.72
ATG4D-201ENST00000309469 MED17Q9NVC6 651 aa19.54■□□□□ 0.72
ATG4D-201ENST00000309469 ADAMTS9Q9P2N4 1935 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 SNTNA6NMZ2 147 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 KDM4EB2RXH2 506 aaPredicted RBP19.53■□□□□ 0.72
ATG4D-201ENST00000309469 RCBTB2O95199 551 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 FXYD6P3P58550 94 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 ARMCX4Q5H9R4 360 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 SLC29A4Q7RTT9 530 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 PPP1R3BQ86XI6 285 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 PRR22Q8IZ63 422 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 CACTIN-AS1Q8N1I8 211 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 PLEKHA8Q96JA3 519 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 OR5M11Q96RB7 305 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 ADOQ96SZ5 270 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 OCIAD1Q9NX40 245 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 OR6C76A6NM76 312 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 EFCAB9A8MZ26 197 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 TO15178 435 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 REM1O75628 298 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 HBQ1P09105 142 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 SAGP10523 405 aaPredicted RBP19.53■□□□□ 0.72
ATG4D-201ENST00000309469 BMP7P18075 431 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 TBXA2RP21731 343 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 LCN1P31025 176 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 NR0B1P51843 470 aaKnown RBP19.53■□□□□ 0.72
ATG4D-201ENST00000309469 COPZ1P61923 177 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 LSM3P62310 102 aaKnown RBP19.53■□□□□ 0.72
ATG4D-201ENST00000309469 CD226Q15762 336 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 KLHL22Q53GT1 634 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 RNLSQ5VYX0 342 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 RPL13AP3Q6NVV1 102 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 SLC46A3Q7Z3Q1 461 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 SLC34A3Q8N130 599 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 GATSQ8NAP1 163 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 ZBTB44Q8NCP5 570 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 OR52L1Q8NGH7 329 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 OR52I1Q8NGK6 324 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 OR13C2Q8NGS9 318 aa19.53■□□□□ 0.72
ATG4D-201ENST00000309469 MRPS18AQ9NVS2 196 aaKnown RBP19.53■□□□□ 0.72
ATG4D-201ENST00000309469 CDC14CA4D256 554 aa19.52■□□□□ 0.72
ATG4D-201ENST00000309469 FOXD2O60548 495 aaPredicted RBP19.52■□□□□ 0.72
ATG4D-201ENST00000309469 ONECUT2O95948 504 aa19.52■□□□□ 0.72
ATG4D-201ENST00000309469 HEXBP07686 556 aa19.52■□□□□ 0.72
ATG4D-201ENST00000309469 NGFRP08138 427 aa19.52■□□□□ 0.72
ATG4D-201ENST00000309469 MED22Q15528 200 aa19.52■□□□□ 0.72
ATG4D-201ENST00000309469 ZNF385CQ66K41 422 aaPredicted RBP19.52■□□□□ 0.72
ATG4D-201ENST00000309469 APOOLQ6UXV4 268 aa19.52■□□□□ 0.72
ATG4D-201ENST00000309469 OVCH1Q7RTY7 1134 aa19.52■□□□□ 0.72
ATG4D-201ENST00000309469 PHOSPHO1Q8TCT1 267 aa19.52■□□□□ 0.72
ATG4D-201ENST00000309469 DNAJA4Q8WW22 397 aaPredicted RBP19.52■□□□□ 0.72
ATG4D-201ENST00000309469 APMAPQ9HDC9 416 aa19.52■□□□□ 0.72
ATG4D-201ENST00000309469 CLEC2DQ9UHP7 191 aa19.52■□□□□ 0.72
ATG4D-201ENST00000309469 DIMT1Q9UNQ2 313 aaKnown RBP19.52■□□□□ 0.72
ATG4D-201ENST00000309469 ERGIC3Q9Y282 383 aa19.52■□□□□ 0.72
ATG4D-201ENST00000309469 SIGLEC7Q9Y286 467 aa19.52■□□□□ 0.72
ATG4D-201ENST00000309469 IDSB3KWA1 339 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 NTN3O00634 580 aaPredicted RBP19.51■□□□□ 0.71
ATG4D-201ENST00000309469 SP9P0CG40 484 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 HSMCR30P0CW71 290 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 UBL4AP11441 157 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 ENTPD1P49961 510 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 GPR143P51810 404 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 ZNF528Q3MIS6 628 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 AADACL4Q5VUY2 407 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 RPL3LQ92901 407 aaKnown RBP19.51■□□□□ 0.71
ATG4D-201ENST00000309469 LGALS12Q96DT0 336 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 MGLLQ99685 303 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 ENKD1Q9H0I2 346 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 SMOC1Q9H4F8 434 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 IGHV3-20A0A0C4DH32 117 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 D6RAR5 112 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 GTPBP1O00178 669 aaKnown RBP19.51■□□□□ 0.71
ATG4D-201ENST00000309469 BHLHE40O14503 412 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 OIP5O43482 229 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 HCN1O60741 890 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 PTP4A3O75365 173 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 CLPXO76031 633 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 RAB36O95755 333 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 IL12BP29460 328 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 GAS1P54826 345 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 VBP1P61758 197 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 SKP2Q13309 424 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 TMEM44Q2T9K0 475 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 SMARCD3Q6STE5 483 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 ANKRD37Q7Z713 158 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 BPHLQ86WA6 291 aaPredicted RBP19.51■□□□□ 0.71
ATG4D-201ENST00000309469 ZNF441Q8N8Z8 693 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 RNFT2Q96EX2 444 aa19.51■□□□□ 0.71
ATG4D-201ENST00000309469 EXOSC3Q9NQT5 275 aaKnown RBP19.51■□□□□ 0.71
ATG4D-201ENST00000309469 A0A087WUJ7 227 aa19.5■□□□□ 0.71
ATG4D-201ENST00000309469 IRGMA1A4Y4 181 aa19.5■□□□□ 0.71
ATG4D-201ENST00000309469 ZNF264O43296 627 aa19.5■□□□□ 0.71
ATG4D-201ENST00000309469 TSPAN2O60636 221 aa19.5■□□□□ 0.71
ATG4D-201ENST00000309469 SLC2A10O95528 541 aa19.5■□□□□ 0.71
ATG4D-201ENST00000309469 GRK5P34947 590 aa19.5■□□□□ 0.71
ATG4D-201ENST00000309469 RGS6P49758 472 aa19.5■□□□□ 0.71
ATG4D-201ENST00000309469 NCS1P62166 190 aa19.5■□□□□ 0.71
ATG4D-201ENST00000309469 CRYZQ08257 329 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms