RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 GFRA1P56159 465 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 ATP5IP56385 69 aaPredicted RBP7.6□□□□□ -1.19
CHD6-201ENST00000309279 OR4D2P58180 307 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 Q0VFX4 171 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 AIMP2Q13155 320 aaKnown RBP7.6□□□□□ -1.19
CHD6-201ENST00000309279 PDE7AQ13946 482 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 COL28A1Q2UY09 1125 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 DEFB109BQ30KR1 87 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 KLHL26Q53HC5 615 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 PLAG1Q6DJT9 500 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 RIPOR1Q6ZS17 1223 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 BHLHA15Q7RTS1 189 aaPredicted RBP7.6□□□□□ -1.19
CHD6-201ENST00000309279 SPATA19Q7Z5L4 167 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 RIMKLAQ8IXN7 391 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 ZNF610Q8N9Z0 462 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 NFAM1Q8NET5 270 aaPredicted RBP7.6□□□□□ -1.19
CHD6-201ENST00000309279 M1APQ8TC57 530 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 ELP5Q8TE02 316 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 PTPMT1Q8WUK0 201 aaPredicted RBP7.6□□□□□ -1.19
CHD6-201ENST00000309279 APOBEC4Q8WW27 367 aaKnown RBP7.6□□□□□ -1.19
CHD6-201ENST00000309279 MTERF3Q96E29 417 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 CNRIP1Q96F85 164 aaPredicted RBP7.6□□□□□ -1.19
CHD6-201ENST00000309279 TSSK3Q96PN8 268 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 EBF4Q9BQW3 602 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 PELOQ9BRX2 385 aaKnown RBP7.6□□□□□ -1.19
CHD6-201ENST00000309279 BDH2Q9BUT1 245 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 C1orf50Q9BV19 199 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 REEP4Q9H6H4 257 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 RUBCNLQ9H714 662 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 TRIM45Q9H8W5 580 aaPredicted RBP7.6□□□□□ -1.19
CHD6-201ENST00000309279 LEF1Q9UJU2 399 aaPredicted RBP7.6□□□□□ -1.19
CHD6-201ENST00000309279 UTS2RQ9UKP6 389 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 HRH3Q9Y5N1 445 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 CORINQ9Y5Q5 1042 aa7.6□□□□□ -1.19
CHD6-201ENST00000309279 NUP214P35658 2090 aaPredicted RBP7.59□□□□□ -1.19
CHD6-201ENST00000309279 IGSF10Q6WRI0 2623 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 A0A1W2PS29 197 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 OR6C70A6NIJ9 312 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 SAGE2PA6NJ88 616 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 ANKRD28O15084 1053 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 SLC16A6O15403 523 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 ARHGEF9O43307 516 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 NDUFS6O75380 124 aaKnown RBP7.59□□□□□ -1.19
CHD6-201ENST00000309279 CCNB2O95067 398 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 LDLRP01130 860 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 TP53P04637 393 aaPredicted RBP7.59□□□□□ -1.19
CHD6-201ENST00000309279 CPMP14384 443 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 CSNK2A2P19784 350 aaPredicted RBP7.59□□□□□ -1.19
CHD6-201ENST00000309279 PRPS1L1P21108 318 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 RPL3P39023 403 aaKnown RBP7.59□□□□□ -1.19
CHD6-201ENST00000309279 GATA4P43694 442 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 CCR4P51679 360 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 CAPZA1P52907 286 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 SUCLG1P53597 346 aaKnown RBP7.59□□□□□ -1.19
CHD6-201ENST00000309279 ID2Q02363 134 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 CAPRIN1Q14444 709 aaKnown RBP7.59□□□□□ -1.19
CHD6-201ENST00000309279 EXT1Q16394 746 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 TBR1Q16650 682 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 SPRED3Q2MJR0 410 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 LSM12Q3MHD2 195 aaKnown RBP7.59□□□□□ -1.19
CHD6-201ENST00000309279 WLSQ5T9L3 541 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 C6orf163Q5TEZ5 329 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 C19orf48Q6RUI8 117 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 COLCA1Q6ZS62 124 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 DCXRQ7Z4W1 244 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 TICAM1Q8IUC6 712 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 CHERPQ8IWX8 916 aaKnown RBP7.59□□□□□ -1.19
CHD6-201ENST00000309279 ZNF295-AS1Q8N0V1 137 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 CLEC4FQ8N1N0 589 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 SLC15A4Q8N697 577 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 MINDY2Q8NBR6 621 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 CLEC1AQ8NC01 280 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 APCDD1LQ8NCL9 501 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 MORN4Q8NDC4 146 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 BVESQ8NE79 360 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 B3GNT7Q8NFL0 401 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 MITD1Q8WV92 249 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 DAZLQ92904 295 aaKnown RBP7.59□□□□□ -1.19
CHD6-201ENST00000309279 REXO5Q96IC2 774 aaKnown RBP7.59□□□□□ -1.19
CHD6-201ENST00000309279 OR52B2Q96RD2 323 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 CCDC28BQ9BUN5 200 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 SMURF1Q9HCE7 757 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 ZNF160Q9HCG1 818 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 MMP25Q9NPA2 562 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 ATP13A2Q9NQ11 1180 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 MIEF1Q9NQG6 463 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 PNO1Q9NRX1 252 aaKnown RBP7.59□□□□□ -1.19
CHD6-201ENST00000309279 FGFR1OP2Q9NVK5 253 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 AIG1Q9NVV5 245 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 ENTPD4Q9Y227 616 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 ZNF780BQ9Y6R6 833 aa7.59□□□□□ -1.19
CHD6-201ENST00000309279 MYOCOSA0A1B0GUC4 107 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 MYO1GB0I1T2 1018 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 C17orf105B2RV13 164 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 HRKO00198 91 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 GPX5O75715 221 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 LRATO95237 230 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 IGKV3-11P04433 115 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 IFNA16P05015 189 aa7.58□□□□□ -1.2
CHD6-201ENST00000309279 SERPINA7P05543 415 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms