RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 NOVA1P51513 510 aaKnown RBP11.04□□□□□ -0.64
TPM3-202ENST00000302206 GPR143P51810 404 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 LSM11P83369 360 aaKnown RBP eCLIP11.04□□□□□ -0.64
TPM3-202ENST00000302206 MC2RQ01718 297 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 PIGFQ07326 219 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 TBCEQ15813 527 aaPredicted RBP11.04□□□□□ -0.64
TPM3-202ENST00000302206 TMEM44Q2T9K0 475 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 SYT6Q5T7P8 510 aaPredicted RBP11.04□□□□□ -0.64
TPM3-202ENST00000302206 UBE2UQ5VVX9 321 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 ULK3Q6PHR2 472 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 LINC00114Q6XXX2 140 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 ZNF620Q6ZNG0 422 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 AHSA2Q719I0 299 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 ANKRD37Q7Z713 158 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 LAPTM4BQ86VI4 370 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 ERI1Q8IV48 349 aaKnown RBP11.04□□□□□ -0.64
TPM3-202ENST00000302206 C9orf40Q8IXQ3 194 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 CDK20Q8IZL9 346 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 SLC34A3Q8N130 599 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 ZNF614Q8N883 585 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 BMPERQ8N8U9 685 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 SLC38A9Q8NBW4 561 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 OR4C3Q8NH37 302 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 BRIX1Q8TDN6 353 aaKnown RBP11.04□□□□□ -0.64
TPM3-202ENST00000302206 DNAJA4Q8WW22 397 aaPredicted RBP11.04□□□□□ -0.64
TPM3-202ENST00000302206 FGF11Q92914 225 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 TP53INP1Q96A56 240 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 NMD3Q96D46 503 aaKnown RBP11.04□□□□□ -0.64
TPM3-202ENST00000302206 CRELD1Q96HD1 420 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 LRFN5Q96NI6 719 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 WWTR1Q9GZV5 400 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 WDR54Q9H977 334 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 ACOT13Q9NPJ3 140 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 FBXO8Q9NRD0 319 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 FLRT3Q9NZU0 649 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 NXT1Q9UKK6 140 aaKnown RBP11.04□□□□□ -0.64
TPM3-202ENST00000302206 MED31Q9Y3C7 131 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 CDH10Q9Y6N8 788 aa11.04□□□□□ -0.64
TPM3-202ENST00000302206 UNC119BA6NIH7 251 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 SAGE2PA6NJ88 616 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 SCDO00767 359 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 AHCYL1O43865 530 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 PIP5K1CO60331 668 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 TSPAN2O60636 221 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 CPNE3O75131 537 aaKnown RBP11.03□□□□□ -0.64
TPM3-202ENST00000302206 ALOX12BO75342 701 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 UTS2O95399 124 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 IGF2P01344 180 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 HMGN1P05114 100 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 SLC5A2P31639 672 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 PNLIPRP2P54317 469 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 GP2P55259 537 aaKnown RBP11.03□□□□□ -0.64
TPM3-202ENST00000302206 LSAMPQ13449 338 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 IRF3Q14653 427 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 NNATQ16517 81 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 GPR107Q5VW38 600 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 RNLSQ5VYX0 342 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 TCEAL6Q6IPX3 200 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 WDR88Q6ZMY6 472 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 CYP4Z2PQ8N1L4 340 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 NFAM1Q8NET5 270 aaPredicted RBP11.03□□□□□ -0.64
TPM3-202ENST00000302206 B3GNT7Q8NFL0 401 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 TMEM163Q8TC26 289 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 RAB2BQ8WUD1 216 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 METTL21AQ8WXB1 218 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 ZCCHC14Q8WYQ9 949 aaKnown RBP11.03□□□□□ -0.64
TPM3-202ENST00000302206 TCEAL3Q969E4 200 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 SLC38A2Q96QD8 506 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 CDCA4Q9BXL8 241 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 OCIAD1Q9NX40 245 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 TVP23BQ9NYZ1 205 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 SELENONQ9NZV5 590 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 CNIH4Q9P003 139 aa11.03□□□□□ -0.64
TPM3-202ENST00000302206 RPL36Q9Y3U8 105 aaKnown RBP11.03□□□□□ -0.64
TPM3-202ENST00000302206 IRGMA1A4Y4 181 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 SNTNA6NMZ2 147 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 IDSB3KWA1 339 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 B4E171 279 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 MEN1O00255 615 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 ENTPD6O75354 484 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 RCBTB2O95199 551 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 UBL4AP11441 157 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 HPGDP15428 266 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 CCKBRP32239 447 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 GRK5P34947 590 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 TSPAN7P41732 249 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 GPR4P46093 362 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 SLC6A8P48029 635 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 ST13P50502 369 aaKnown RBP11.02□□□□□ -0.65
TPM3-202ENST00000302206 EMP2P54851 167 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 NCF4Q15080 339 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 ACSM5Q6NUN0 579 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 MRPL14Q6P1L8 145 aaKnown RBP11.02□□□□□ -0.65
TPM3-202ENST00000302206 TMEM205Q6UW68 189 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 LANCL3Q6ZV70 420 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 SLCO6A1Q86UG4 719 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 ANKRD13BQ86YJ7 626 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 PRSS58Q8IYP2 241 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 STX19Q8N4C7 294 aa11.02□□□□□ -0.65
TPM3-202ENST00000302206 IQCF1Q8N6M8 205 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms