RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 RGS1Q08116 209 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 TP53I3Q53FA7 332 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 HBMQ6B0K9 141 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 PRR23CQ6ZRP0 262 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 OR2L13Q8N349 312 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 ABHD4Q8TB40 342 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 GAL3ST3Q96A11 431 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 RFT1Q96AA3 541 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 RBCK1Q9BYM8 510 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 KCNN2Q9H2S1 579 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 TRIM36Q9NQ86 728 aa22.6■■□□□ 1.21
SPTSSA-201ENST00000298130 FGF17O60258 216 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 ADAM11O75078 769 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 TALDO1P37837 337 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 RPS21P63220 83 aaKnown RBP22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 PLAURQ03405 335 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 ACSM1Q08AH1 577 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 HSD17B8Q92506 261 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 IL21RQ9HBE5 538 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 LYARQ9NX58 379 aaKnown RBP22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 ADAM30Q9UKF2 790 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 LRRN3E7EW58 273 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 SGK494L7N484 410 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 IMPA2O14732 288 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 FABP7O15540 132 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 CT62P0C5K7 136 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 SLC35G6P0C7Q6 338 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 CPMP14384 443 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 SNRPBP14678 240 aaKnown RBP22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 C5AR1P21730 350 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 MRPL28Q13084 256 aaKnown RBP22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 GXYLT1Q4G148 440 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 BEST4Q8NFU0 473 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 OR1E3Q8WZA6 343 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 TNFRSF13CQ96RJ3 184 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 COQ7Q99807 217 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 LRRN3Q9H3W5 708 aa22.59■■□□□ 1.21
SPTSSA-201ENST00000298130 SLC19A2O60779 497 aa22.58■■□□□ 1.21
SPTSSA-201ENST00000298130 SLC43A1O75387 559 aa22.58■■□□□ 1.21
SPTSSA-201ENST00000298130 C1QBP02746 253 aa22.58■■□□□ 1.21
SPTSSA-201ENST00000298130 GABRA3P34903 492 aa22.58■■□□□ 1.21
SPTSSA-201ENST00000298130 GID4Q8IVV7 300 aa22.58■■□□□ 1.21
SPTSSA-201ENST00000298130 FRMD1Q8N878 549 aa22.58■■□□□ 1.21
SPTSSA-201ENST00000298130 SP7Q8TDD2 431 aaPredicted RBP22.58■■□□□ 1.21
SPTSSA-201ENST00000298130 AKAP1Q92667 903 aaKnown RBP eCLIP22.58■■□□□ 1.21
SPTSSA-201ENST00000298130 ZMYND19Q96E35 227 aaPredicted RBP22.58■■□□□ 1.21
SPTSSA-201ENST00000298130 FN3KQ9H479 309 aa22.58■■□□□ 1.21
SPTSSA-201ENST00000298130 CYSLTR2Q9NS75 346 aa22.58■■□□□ 1.21
SPTSSA-201ENST00000298130 SLC23A1Q9UHI7 598 aa22.58■■□□□ 1.21
SPTSSA-201ENST00000298130 DAPP1Q9UN19 280 aa22.58■■□□□ 1.21
SPTSSA-201ENST00000298130 PRSS38A1L453 326 aa22.58■■□□□ 1.2
SPTSSA-201ENST00000298130 NDUFS1P28331 727 aa22.58■■□□□ 1.2
SPTSSA-201ENST00000298130 ACTR1BP42025 376 aa22.58■■□□□ 1.2
SPTSSA-201ENST00000298130 MTNR1BP49286 362 aa22.58■■□□□ 1.2
SPTSSA-201ENST00000298130 ACTR1AP61163 376 aa22.58■■□□□ 1.2
SPTSSA-201ENST00000298130 ZNF85Q03923 595 aa22.58■■□□□ 1.2
SPTSSA-201ENST00000298130 GALEQ14376 348 aa22.58■■□□□ 1.2
SPTSSA-201ENST00000298130 PRRT3Q5FWE3 981 aa22.58■■□□□ 1.2
SPTSSA-201ENST00000298130 BRIX1Q8TDN6 353 aaKnown RBP22.58■■□□□ 1.2
SPTSSA-201ENST00000298130 TRIM63Q969Q1 353 aa22.58■■□□□ 1.2
SPTSSA-201ENST00000298130 TMEM168Q9H0V1 697 aa22.58■■□□□ 1.2
SPTSSA-201ENST00000298130 ZNF222Q9UK12 451 aa22.58■■□□□ 1.2
SPTSSA-201ENST00000298130 ARHGEF9O43307 516 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 DUSP8Q13202 625 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 PRSS45Q7RTY3 260 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 SMPDL3BQ92485 455 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 CNOT9Q92600 299 aaKnown RBP22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 GHSRQ92847 366 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 GCDHQ92947 438 aaPredicted RBP22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 NDC1Q9BTX1 674 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 MRPL15Q9P015 296 aaKnown RBP22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 PSMD9O00233 223 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 SLC6A1P30531 599 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 NAA10P41227 235 aaPredicted RBP22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 PITPNBP48739 271 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 GNG2P59768 71 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 SRP54P61011 504 aaKnown RBP22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 SHC2P98077 582 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 TFF2Q03403 129 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 MAB21L1Q13394 359 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 NTRK2Q16620 822 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 TMEM44Q2T9K0 475 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 ZNF761Q86XN6 746 aaPredicted RBP22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 NR4A3Q92570 626 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 DACT3Q96B18 629 aaPredicted RBP22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 MS4A3Q96HJ5 214 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 COLEC10Q9Y6Z7 277 aa22.57■■□□□ 1.2
SPTSSA-201ENST00000298130 BTCP35070 178 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 MAGEB1P43366 347 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 CCR6P51684 374 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 ACSM3Q53FZ2 586 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 ZNF619Q8N2I2 560 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 OR7G1Q8NGA0 311 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 OR2A5Q96R48 311 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 ADGRL4Q9HBW9 690 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 TEKT2Q9UIF3 430 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 SIGLEC7Q9Y286 467 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 NCKAP1Q9Y2A7 1128 aa22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 ARHGEF17Q96PE2 2063 aaPredicted RBP22.56■■□□□ 1.2
SPTSSA-201ENST00000298130 A0A0G2JK05 382 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms