RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 TEAD2Q15562 447 aa17.79■□□□□ 0.44
TRA2A-201ENST00000297071 UAP1L1Q3KQV9 507 aa17.79■□□□□ 0.44
TRA2A-201ENST00000297071 SLC25A35Q3KQZ1 300 aa17.79■□□□□ 0.44
TRA2A-201ENST00000297071 UBE2NLQ5JXB2 153 aa17.79■□□□□ 0.44
TRA2A-201ENST00000297071 MFSD12Q6NUT3 480 aa17.79■□□□□ 0.44
TRA2A-201ENST00000297071 PRSS42Q7Z5A4 293 aa17.79■□□□□ 0.44
TRA2A-201ENST00000297071 OR4N4Q8N0Y3 316 aa17.79■□□□□ 0.44
TRA2A-201ENST00000297071 ZNF687Q8N1G0 1237 aa17.79■□□□□ 0.44
TRA2A-201ENST00000297071 OR10H4Q8NGA5 316 aa17.79■□□□□ 0.44
TRA2A-201ENST00000297071 PTP4A1Q93096 173 aa17.79■□□□□ 0.44
TRA2A-201ENST00000297071 PPA2Q9H2U2 334 aa17.79■□□□□ 0.44
TRA2A-201ENST00000297071 KLHL31Q9H511 634 aa17.79■□□□□ 0.44
TRA2A-201ENST00000297071 LIN7BQ9HAP6 207 aa17.79■□□□□ 0.44
TRA2A-201ENST00000297071 TBC1D3EA0A087X179 549 aa17.78■□□□□ 0.44
TRA2A-201ENST00000297071 ANTXRLA6NF34 631 aa17.78■□□□□ 0.44
TRA2A-201ENST00000297071 FLRT2O43155 660 aa17.78■□□□□ 0.44
TRA2A-201ENST00000297071 ERI3O43414 337 aaKnown RBP17.78■□□□□ 0.44
TRA2A-201ENST00000297071 PRICKLE3O43900 615 aaPredicted RBP17.78■□□□□ 0.44
TRA2A-201ENST00000297071 CTRB1P17538 263 aa17.78■□□□□ 0.44
TRA2A-201ENST00000297071 ENPP1P22413 925 aa17.78■□□□□ 0.44
TRA2A-201ENST00000297071 BCL6P41182 706 aa17.78■□□□□ 0.44
TRA2A-201ENST00000297071 MECP2P51608 486 aaKnown RBP17.78■□□□□ 0.44
TRA2A-201ENST00000297071 CCR9P51686 369 aa17.78■□□□□ 0.44
TRA2A-201ENST00000297071 AP3S2P59780 193 aa17.78■□□□□ 0.44
TRA2A-201ENST00000297071 SRP54P61011 504 aaKnown RBP17.78■□□□□ 0.44
TRA2A-201ENST00000297071 MRPS10P82664 201 aaKnown RBP17.78■□□□□ 0.44
TRA2A-201ENST00000297071 HNRNPA1L2Q32P51 320 aaKnown RBP17.78■□□□□ 0.44
TRA2A-201ENST00000297071 CTRB2Q6GPI1 263 aa17.78■□□□□ 0.44
TRA2A-201ENST00000297071 UNQ9370/PRO34162Q6UXP9 181 aa17.78■□□□□ 0.44
TRA2A-201ENST00000297071 ZNF836Q6ZNA1 936 aa17.78■□□□□ 0.44
TRA2A-201ENST00000297071 IQCF2Q8IXL9 164 aa17.78■□□□□ 0.44
TRA2A-201ENST00000297071 OR2T4Q8NH00 348 aa17.78■□□□□ 0.44
TRA2A-201ENST00000297071 RBPMSQ93062 196 aaKnown RBP17.78■□□□□ 0.44
TRA2A-201ENST00000297071 RPS6KB2Q9UBS0 482 aa17.78■□□□□ 0.44
TRA2A-201ENST00000297071 FBXL21Q9UKT6 434 aa17.78■□□□□ 0.44
TRA2A-201ENST00000297071 PCDHGA9Q9Y5G4 932 aaKnown RBP17.78■□□□□ 0.44
TRA2A-201ENST00000297071 A0A0G2JN53 185 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 E9PI62 339 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 PPM1DO15297 605 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 CD3GP09693 182 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 IFI6P09912 130 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 ATF1P18846 271 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 ZP1P60852 638 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 RAB8AP61006 207 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 E2F1Q01094 437 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 ELAVL3Q14576 367 aaKnown RBP17.77■□□□□ 0.44
TRA2A-201ENST00000297071 EXOSC6Q5RKV6 272 aaKnown RBP17.77■□□□□ 0.44
TRA2A-201ENST00000297071 NLRC3Q7RTR2 1065 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 DEFB128Q7Z7B8 93 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 CDK20Q8IZL9 346 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 OR51Q1Q8NH59 317 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 TMEM239Q8WW34 195 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 C4orf36Q96KX1 117 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 IFT27Q9BW83 186 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 C20orf85Q9H1P6 137 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 WDR45Q9Y484 360 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 NUMA1Q14980 2115 aa17.77■□□□□ 0.44
TRA2A-201ENST00000297071 ABHD14A-ACY1A0A1B0GW23 586 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 M0R233 179 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 AGRPO00253 132 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 CCL16O15467 120 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 SSNA1O43805 119 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 RNGTTO60942 597 aaKnown RBP17.77■□□□□ 0.43
TRA2A-201ENST00000297071 PRKRAO75569 313 aaKnown RBP17.77■□□□□ 0.43
TRA2A-201ENST00000297071 NTN1O95631 604 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 GNRH1P01148 92 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 DBIP07108 87 aaKnown RBP17.77■□□□□ 0.43
TRA2A-201ENST00000297071 GIPP09681 153 aaPredicted RBP17.77■□□□□ 0.43
TRA2A-201ENST00000297071 ZNF250P15622 560 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 NAGAP17050 411 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 ZP3P21754 424 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 MNDAP41218 407 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 ACTA2P62736 377 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 ACTG2P63267 376 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 SLC3A1Q07837 685 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 FAM27D1Q5T7N8 215 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 MFSD9Q8NBP5 474 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 TCEAL4Q96EI5 215 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 HDAC8Q9BY41 377 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 C14orf105Q9NVL8 296 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 NTNG1Q9Y2I2 539 aa17.77■□□□□ 0.43
TRA2A-201ENST00000297071 A0A1W2PPL8 197 aa17.76■□□□□ 0.43
TRA2A-201ENST00000297071 CDHR4A6H8M9 788 aa17.76■□□□□ 0.43
TRA2A-201ENST00000297071 RIIAD1A6NNX1 92 aa17.76■□□□□ 0.43
TRA2A-201ENST00000297071 C4orf51C9J302 202 aa17.76■□□□□ 0.43
TRA2A-201ENST00000297071 FCMRO60667 390 aa17.76■□□□□ 0.43
TRA2A-201ENST00000297071 KCNJ13O60928 360 aa17.76■□□□□ 0.43
TRA2A-201ENST00000297071 IL5P05113 134 aa17.76■□□□□ 0.43
TRA2A-201ENST00000297071 PSMB1P20618 241 aaKnown RBP17.76■□□□□ 0.43
TRA2A-201ENST00000297071 PTGS2P35354 604 aa17.76■□□□□ 0.43
TRA2A-201ENST00000297071 GBX2P52951 348 aaPredicted RBP17.76■□□□□ 0.43
TRA2A-201ENST00000297071 STXBP1P61764 594 aaKnown RBP17.76■□□□□ 0.43
TRA2A-201ENST00000297071 CDK3Q00526 305 aa17.76■□□□□ 0.43
TRA2A-201ENST00000297071 RPL6Q02878 288 aaKnown RBP17.76■□□□□ 0.43
TRA2A-201ENST00000297071 ILF3Q12906 894 aaKnown RBP eCLIP17.76■□□□□ 0.43
TRA2A-201ENST00000297071 DHCR24Q15392 516 aa17.76■□□□□ 0.43
TRA2A-201ENST00000297071 NHLRC3Q5JS37 347 aa17.76■□□□□ 0.43
TRA2A-201ENST00000297071 OLFML2AQ68BL7 652 aa17.76■□□□□ 0.43
TRA2A-201ENST00000297071 NUDT18Q6ZVK8 323 aa17.76■□□□□ 0.43
TRA2A-201ENST00000297071 ANKRD33Q7Z3H0 272 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms