RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 HIPK4Q8NE63 616 aa10.98□□□□□ -0.65
HMGB2-201ENST00000296503 OR2M3Q8NG83 312 aa10.98□□□□□ -0.65
HMGB2-201ENST00000296503 TRUB1Q8WWH5 349 aaKnown RBP10.98□□□□□ -0.65
HMGB2-201ENST00000296503 RAB8BQ92930 207 aa10.98□□□□□ -0.65
HMGB2-201ENST00000296503 VPS33AQ96AX1 596 aa10.98□□□□□ -0.65
HMGB2-201ENST00000296503 NEURL3Q96EH8 262 aa10.98□□□□□ -0.65
HMGB2-201ENST00000296503 ITCHQ96J02 903 aa10.98□□□□□ -0.65
HMGB2-201ENST00000296503 DMRTA2Q96SC8 542 aa10.98□□□□□ -0.65
HMGB2-201ENST00000296503 SDF2Q99470 211 aa10.98□□□□□ -0.65
HMGB2-201ENST00000296503 HOXD1Q9GZZ0 328 aa10.98□□□□□ -0.65
HMGB2-201ENST00000296503 SERHL2Q9H4I8 314 aa10.98□□□□□ -0.65
HMGB2-201ENST00000296503 PLEKHB1Q9UF11 243 aaPredicted RBP10.98□□□□□ -0.65
HMGB2-201ENST00000296503 CAMK2AQ9UQM7 478 aa10.98□□□□□ -0.65
HMGB2-201ENST00000296503 RPH3AQ9Y2J0 694 aaPredicted RBP10.98□□□□□ -0.65
HMGB2-201ENST00000296503 MRPS18CQ9Y3D5 142 aaKnown RBP10.98□□□□□ -0.65
HMGB2-201ENST00000296503 PCDHGB5Q9Y5G0 923 aa10.98□□□□□ -0.65
HMGB2-201ENST00000296503 ICE1Q9Y2F5 2266 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 COL12A1Q99715 3063 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 NPIPA5A0A0B4J1W7 369 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 LOC100653049A0A140TA62 436 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 NPIPA7E9PJI5 369 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 MAGEB3O15480 346 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 WDR1O75083 606 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 KRT34O76011 436 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 AGR2O95994 175 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 NGFRP08138 427 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 HOXD4P09016 255 aaPredicted RBP10.97□□□□□ -0.65
HMGB2-201ENST00000296503 NPIPA8P0DM63 369 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 BMP2P12643 396 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 GABRA1P14867 456 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 HK1P19367 917 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 SLC7A1P30825 629 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 CEACAM7Q14002 265 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 TIGD2Q4W5G0 525 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 XKRXQ6PP77 449 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 RNF130Q86XS8 419 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 ZNF808Q8N4W9 903 aaPredicted RBP10.97□□□□□ -0.65
HMGB2-201ENST00000296503 ZNF614Q8N883 585 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 FADS6Q8N9I5 356 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 ZNF527Q8NB42 609 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 MINDY2Q8NBR6 621 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 OR10Q1Q8NGQ4 319 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 PNPT1Q8TCS8 783 aaKnown RBP10.97□□□□□ -0.65
HMGB2-201ENST00000296503 PHF10Q8WUB8 498 aaKnown RBP10.97□□□□□ -0.65
HMGB2-201ENST00000296503 ITLN2Q8WWU7 325 aaPredicted RBP10.97□□□□□ -0.65
HMGB2-201ENST00000296503 ISOC1Q96CN7 298 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 SFXN2Q96NB2 322 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 CGREF1Q99674 301 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 UGT2B28Q9BY64 529 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 OR2B2Q9GZK3 357 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 HHATLQ9HCP6 504 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 COQ3Q9NZJ6 369 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 CCDC167Q9P0B6 97 aa10.97□□□□□ -0.65
HMGB2-201ENST00000296503 USP9YO00507 2555 aaPredicted RBP10.97□□□□□ -0.65
HMGB2-201ENST00000296503 SPTBN1Q01082 2364 aaKnown RBP10.97□□□□□ -0.65
HMGB2-201ENST00000296503 TCRBV3S1A0A5B6 114 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 C7orf72A4D263 438 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 GTPBP1O00178 669 aaKnown RBP10.96□□□□□ -0.65
HMGB2-201ENST00000296503 FBP2O00757 339 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 ZIC3O60481 467 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 STX11O75558 287 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 KRT75O95678 551 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 CLDN1O95832 211 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 ACTL6AO96019 429 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 AK1P00568 194 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 DCTP40126 519 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 ZFP36L2P47974 494 aaKnown RBP10.96□□□□□ -0.65
HMGB2-201ENST00000296503 KHKP50053 298 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 NUDT2P50583 147 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 ATP12AP54707 1039 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 MS4A2Q01362 244 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 CRYZQ08257 329 aaKnown RBP10.96□□□□□ -0.65
HMGB2-201ENST00000296503 TRIM25Q14258 630 aaKnown RBP10.96□□□□□ -0.65
HMGB2-201ENST00000296503 GK3PQ14409 553 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 GPR68Q15743 365 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 ARHGAP11BQ3KRB8 267 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 AGKQ53H12 422 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 NHSL2Q5HYW2 709 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 C6orf10Q5SRN2 563 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 C1orf185Q5T7R7 199 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 INTS11Q5TA45 600 aaKnown RBP10.96□□□□□ -0.65
HMGB2-201ENST00000296503 ENPP6Q6UWR7 440 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 DNAJC14Q6Y2X3 702 aaPredicted RBP10.96□□□□□ -0.65
HMGB2-201ENST00000296503 MAMDC2Q7Z304 686 aaPredicted RBP10.96□□□□□ -0.65
HMGB2-201ENST00000296503 PM20D2Q8IYS1 436 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 RPRMLQ8N4K4 120 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 BHLHE22Q8NFJ8 381 aaPredicted RBP10.96□□□□□ -0.65
HMGB2-201ENST00000296503 PHOSPHO1Q8TCT1 267 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 RND1Q92730 232 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 TFAP2CQ92754 450 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 EME1Q96AY2 570 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 SDCCAG3Q96C92 435 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 SH3YL1Q96HL8 342 aaPredicted RBP10.96□□□□□ -0.65
HMGB2-201ENST00000296503 PLEKHA8Q96JA3 519 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 TMEM165Q9HC07 324 aa10.96□□□□□ -0.65
HMGB2-201ENST00000296503 HECTD1Q9ULT8 2610 aa10.96□□□□□ -0.66
HMGB2-201ENST00000296503 AHRRA9YTQ3 701 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 B4DXG7 233 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 SULT1C4O75897 302 aa10.95□□□□□ -0.66
HMGB2-201ENST00000296503 C1QCP02747 245 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms