RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 PRDX3P30048 256 aaKnown RBP16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 SLC1A3P43003 542 aa16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 PDX1P52945 283 aa16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 CLDN20P56880 219 aa16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 ASPGQ86U10 573 aa16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 TRMT2BQ96GJ1 504 aaKnown RBP16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 IFT22Q9H7X7 185 aa16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 NDRG3Q9UGV2 375 aa16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 RCE1Q9Y256 329 aa16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 GALK2Q01415 458 aa16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 MGAT3Q09327 533 aa16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 KIAA0319Q5VV43 1072 aa16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 PHOSPHO1Q8TCT1 267 aa16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 RNF128Q8TEB7 428 aa16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 NKX6-2Q9C056 277 aaPredicted RBP16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 DMRT3Q9NQL9 472 aa16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 C19orf12Q9NSK7 152 aa16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 ACSS1Q9NUB1 689 aaPredicted RBP16.45■□□□□ 0.22
PCDHA13-201ENST00000289272 NUPL2O15504 423 aaKnown RBP16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 TXNL1O43396 289 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 TGOLN2O43493 480 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 CSTAP01040 98 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 TGM1P22735 817 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 GDNFP39905 211 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 AFF3P51826 1226 aaKnown RBP16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 SH2D5Q6ZV89 423 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 GALNT10Q86SR1 603 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 PAQR8Q8TEZ7 354 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 MYADMQ96S97 322 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 TMEM38AQ9H6F2 299 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 CYB5R1Q9UHQ9 305 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 ATXN1LP0C7T5 689 aaKnown RBP16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 XKR7Q5GH72 579 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 AWAT2Q6E213 333 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 SLCO4A1Q96BD0 722 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 C1GALT1Q9NS00 363 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 TMPRSS11EQ9UL52 423 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 HRH3Q9Y5N1 445 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 TMEM200CA6NKL6 621 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 PPP6CO00743 305 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 PMS2P2O95744 297 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 SLC6A9P48067 706 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 NXNL2Q5VZ03 156 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 ZNF852Q6ZMS4 543 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 NANOGP1Q8N7R0 232 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 DTX3Q8N9I9 347 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 WDR83Q9BRX9 315 aaKnown RBP16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 CXCL16Q9H2A7 254 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 LRFN1Q9P244 771 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 GMPR2Q9P2T1 348 aaKnown RBP16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 AK6Q9Y3D8 172 aaKnown RBP16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 HTR4Q13639 388 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 CST6Q15828 149 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 SFXN4Q6P4A7 337 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 GPR155Q7Z3F1 870 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 ZER1Q7Z7L7 766 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 KCT2Q8NC54 265 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 HOXB13Q92826 284 aaPredicted RBP16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 TMEM43Q9BTV4 400 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 DDX31Q9H8H2 851 aaKnown RBP16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 ERVMER34-1Q9H9K5 563 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 UFSP2Q9NUQ7 469 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 HRASLS2Q9NWW9 162 aa16.44■□□□□ 0.22
PCDHA13-201ENST00000289272 A0A1W2PQU0 124 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 A0A1W2PS29 197 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 AGAP14A8MT82 685 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 RGS13O14921 159 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 SEC14L5O43304 696 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 GPX2P18283 190 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 HOXC13P31276 330 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 SELENBP1Q13228 472 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 ALKBH2Q6NS38 261 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 PODNL1Q6PEZ8 512 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 TMEM200AQ86VY9 491 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 OLIG1Q8TAK6 271 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 ISG20Q96AZ6 181 aaKnown RBP16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 GALNT9Q9HCQ5 603 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 NDUFB11Q9NX14 153 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 ARRDC5A6NEK1 342 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 CSNK1DP48730 415 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 IL13RA1P78552 427 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 OR4K17Q8NGC6 315 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 FNDC9Q8TBE3 224 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 WDR20Q8TBZ3 569 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 LURAP1Q96LR2 239 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 PKMYT1Q99640 499 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 ALOXE3Q9BYJ1 711 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 FAM212BQ9NTI7 297 aaPredicted RBP16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 COL16A1Q07092 1604 aaPredicted RBP16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 TNRC6CQ9HCJ0 1690 aaKnown RBP16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 A0A1W2PP55 124 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 TCRBV5S2A0A599 114 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 GLOD5A6NK44 160 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 FOXE1O00358 373 aaPredicted RBP16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 PNMTP11086 282 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 SLC22A25Q6T423 547 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 ALKAL2Q6UX46 152 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 VASH1Q7L8A9 365 aaPredicted RBP16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 PMEPA1Q969W9 287 aa16.43■□□□□ 0.22
PCDHA13-201ENST00000289272 TSPAN10Q9H1Z9 355 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms