RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 SERINC1Q9NRX5 453 aa16.98■□□□□ 0.31
MALSU1-201ENST00000287543 THUMPD1Q9NXG2 353 aaKnown RBP16.98■□□□□ 0.31
MALSU1-201ENST00000287543 PRDM4Q9UKN5 801 aa16.98■□□□□ 0.31
MALSU1-201ENST00000287543 ITPR2Q14571 2701 aa16.98■□□□□ 0.31
MALSU1-201ENST00000287543 CENPEQ02224 2701 aa16.98■□□□□ 0.31
MALSU1-201ENST00000287543 PKDREJQ9NTG1 2253 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 A0A0J9YW62 118 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 FAM234BA2RU67 622 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 POLR3GO15318 223 aaPredicted RBP16.97■□□□□ 0.31
MALSU1-201ENST00000287543 SS18L1O75177 396 aaPredicted RBP16.97■□□□□ 0.31
MALSU1-201ENST00000287543 CYP7B1O75881 506 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 AQP8O94778 261 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 ANP32DO95626 131 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 NTN1O95631 604 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 FKBP2P26885 142 aaKnown RBP16.97■□□□□ 0.31
MALSU1-201ENST00000287543 CPOXP36551 454 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 CD79BP40259 229 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 MRPL19P49406 292 aaKnown RBP16.97■□□□□ 0.31
MALSU1-201ENST00000287543 POLR2JP52435 117 aaKnown RBP16.97■□□□□ 0.31
MALSU1-201ENST00000287543 SIRPAP78324 504 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 SKP2Q13309 424 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 QPRTQ15274 297 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 GUSBP1Q15486 140 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 TTMPQ5BVD1 217 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 FBXW10Q5XX13 1052 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 LRRC74BQ6ZQY2 392 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 LINC01560Q8TB33 94 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 NPAS1Q99742 590 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 CCDC28BQ9BUN5 200 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 THUMPD3Q9BV44 507 aaKnown RBP16.97■□□□□ 0.31
MALSU1-201ENST00000287543 TMEM185BQ9H7F4 350 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 GP6Q9HCN6 339 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 TCF7L2Q9NQB0 619 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 EXOSC3Q9NQT5 275 aaKnown RBP16.97■□□□□ 0.31
MALSU1-201ENST00000287543 INTS9Q9NV88 658 aaKnown RBP16.97■□□□□ 0.31
MALSU1-201ENST00000287543 CALML5Q9NZT1 146 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 KCNE5Q9UJ90 142 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 CACNA1CQ13936 2221 aa16.97■□□□□ 0.31
MALSU1-201ENST00000287543 C9JVG2 144 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 CGAP01215 116 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 OPN1LWP04000 364 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 GSNP06396 782 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 UBTFL6P0CB48 400 aaPredicted RBP16.96■□□□□ 0.31
MALSU1-201ENST00000287543 NR2F1P10589 423 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 POU2F1P14859 743 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 H2AFXP16104 143 aaPredicted RBP16.96■□□□□ 0.31
MALSU1-201ENST00000287543 SFTPDP35247 375 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 PGM1P36871 562 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 SLC6A8P48029 635 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 KCNJ5P48544 419 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 PPP2R2AP63151 447 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 KCNJ10P78508 379 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 RNPS1Q15287 305 aaKnown RBP16.96■□□□□ 0.31
MALSU1-201ENST00000287543 NDUFAF6Q330K2 333 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 TMEM176BQ3YBM2 270 aaPredicted RBP16.96■□□□□ 0.31
MALSU1-201ENST00000287543 FRRS1Q6ZNA5 592 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 NINJ1Q92982 152 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 GPATCH1Q9BRR8 931 aaKnown RBP16.96■□□□□ 0.31
MALSU1-201ENST00000287543 TACO1Q9BSH4 297 aaKnown RBP16.96■□□□□ 0.31
MALSU1-201ENST00000287543 PLSCR4Q9NRQ2 329 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 ACER3Q9NUN7 267 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 TMEM45AQ9NWC5 275 aa16.96■□□□□ 0.31
MALSU1-201ENST00000287543 SPIN1Q9Y657 262 aaPredicted RBP16.96■□□□□ 0.31
MALSU1-201ENST00000287543 SH3D21A4FU49 640 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 H6PDO95479 791 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 SLC7A1P30825 629 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 CDKN2CP42773 168 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 RNF144AP50876 292 aaPredicted RBP16.95■□□□□ 0.3
MALSU1-201ENST00000287543 CHRNEQ04844 493 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 FUT5Q11128 374 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 TOMM34Q15785 309 aaPredicted RBP16.95■□□□□ 0.3
MALSU1-201ENST00000287543 MAPK14Q16539 360 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 C3orf33Q6P1S2 294 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 STK32CQ86UX6 486 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 SLC43A2Q8N370 569 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 ARFGAP2Q8N6H7 521 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 FAM71CQ8NEG0 241 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 ZFP90Q8TF47 636 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 SLC25A43Q8WUT9 341 aaPredicted RBP16.95■□□□□ 0.3
MALSU1-201ENST00000287543 MARK4Q96L34 752 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 KLHDC3Q9BQ90 382 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 OPN3Q9H1Y3 402 aaPredicted RBP16.95■□□□□ 0.3
MALSU1-201ENST00000287543 P2RX2Q9UBL9 471 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 ITGB1BP2Q9UKP3 347 aa16.95■□□□□ 0.3
MALSU1-201ENST00000287543 TMEM247A6NEH6 219 aa16.94■□□□□ 0.3
MALSU1-201ENST00000287543 AGAP5A6NIR3 686 aa16.94■□□□□ 0.3
MALSU1-201ENST00000287543 C16orf97H3BN30 126 aa16.94■□□□□ 0.3
MALSU1-201ENST00000287543 EFNA2O43921 213 aa16.94■□□□□ 0.3
MALSU1-201ENST00000287543 APOBEC1P41238 236 aaKnown RBP16.94■□□□□ 0.3
MALSU1-201ENST00000287543 IDH3AP50213 366 aa16.94■□□□□ 0.3
MALSU1-201ENST00000287543 SESN3P58005 492 aa16.94■□□□□ 0.3
MALSU1-201ENST00000287543 RAC3P60763 192 aa16.94■□□□□ 0.3
MALSU1-201ENST00000287543 FAM27E3Q08E93 113 aa16.94■□□□□ 0.3
MALSU1-201ENST00000287543 ZNF239Q16600 458 aaKnown RBP16.94■□□□□ 0.3
MALSU1-201ENST00000287543 ZSWIM7Q19AV6 140 aa16.94■□□□□ 0.3
MALSU1-201ENST00000287543 TIGD2Q4W5G0 525 aa16.94■□□□□ 0.3
MALSU1-201ENST00000287543 ZNF474Q6S9Z5 364 aaPredicted RBP16.94■□□□□ 0.3
MALSU1-201ENST00000287543 PEX5LQ8IYB4 626 aa16.94■□□□□ 0.3
MALSU1-201ENST00000287543 ANKFN1Q8N957 763 aa16.94■□□□□ 0.3
MALSU1-201ENST00000287543 ZNF610Q8N9Z0 462 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms