RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 TPRA1Q86W33 373 aa8.57□□□□□ -1.04
SMC2-201ENST00000286398 FAM72BQ86X60 149 aa8.57□□□□□ -1.04
SMC2-201ENST00000286398 OR4N5Q8IXE1 308 aa8.57□□□□□ -1.04
SMC2-201ENST00000286398 PRR18Q8N4B5 295 aa8.57□□□□□ -1.04
SMC2-201ENST00000286398 ANKRD53Q8N9V6 530 aa8.57□□□□□ -1.04
SMC2-201ENST00000286398 OR10Z1Q8NGY1 313 aa8.57□□□□□ -1.04
SMC2-201ENST00000286398 FUBP1Q96AE4 644 aaKnown RBP8.57□□□□□ -1.04
SMC2-201ENST00000286398 C4orf36Q96KX1 117 aa8.57□□□□□ -1.04
SMC2-201ENST00000286398 BMFQ96LC9 184 aa8.57□□□□□ -1.04
SMC2-201ENST00000286398 ZDHHC11Q9H8X9 412 aa8.57□□□□□ -1.04
SMC2-201ENST00000286398 GALNT9Q9HCQ5 603 aa8.57□□□□□ -1.04
SMC2-201ENST00000286398 USP36Q9P275 1121 aaKnown RBP8.57□□□□□ -1.04
SMC2-201ENST00000286398 MRPS17Q9Y2R5 130 aaKnown RBP8.57□□□□□ -1.04
SMC2-201ENST00000286398 PCDHA9Q9Y5H5 950 aa8.57□□□□□ -1.04
SMC2-201ENST00000286398 IER3IP1Q9Y5U9 82 aa8.57□□□□□ -1.04
SMC2-201ENST00000286398 FGF4P08620 206 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 APEX1P27695 318 aaKnown RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 HNF1BP35680 557 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 RPP30P78346 268 aaKnown RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 SLC10A2Q12908 348 aaPredicted RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 EBPQ15125 230 aaKnown RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 C4orf17Q53FE4 359 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 IER5LQ5T953 404 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 RBMS3Q6XE24 437 aaKnown RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 GPR137CQ8N3F9 429 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 TBC1D20Q96BZ9 403 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 ELF4Q99607 663 aaPredicted RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 ACTRT3Q9BYD9 372 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 TXLNGYQ9BZA5 131 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 EXO1Q9UQ84 846 aaKnown RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 NPFFR2Q9Y5X5 522 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 ARL2-SNX15V9GYD0 113 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 CDC42BPAQ5VT25 1732 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 GPR37L1O60883 481 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 TOX4O94842 621 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 SMPD1P17405 629 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 PRPS1P60891 318 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 RPS18P62269 152 aaKnown RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 ZNF91Q05481 1191 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 LTBQ06643 244 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 SLC22A6Q4U2R8 563 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 SDR9C7Q8NEX9 313 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 ZFAND1Q8TCF1 268 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 THAP3Q8WTV1 239 aaPredicted RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 ST8SIA4Q92187 359 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 DAZLQ92904 295 aaKnown RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 KCTD12Q96CX2 325 aaKnown RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 GPR88Q9GZN0 384 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 C7orf72A4D263 438 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 GRXCR2A6NFK2 248 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 LATO43561 262 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 F10P00742 488 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 GPX3P22352 226 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 HLA-FP30511 346 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 GDNFP39905 211 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 GRM2Q14416 872 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 LRRC26Q2I0M4 334 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 ADGRF3Q8IZF5 1079 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 ADAMTS16Q8TE57 1224 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 DEFB118Q96PH6 123 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 NAA11Q9BSU3 229 aaPredicted RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 OR52A5Q9H2C5 316 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 C2orf78A6NCI8 922 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 GABRPO00591 440 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 MPPED1O15442 326 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 ZIC2O95409 532 aaPredicted RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 SIM1P81133 766 aaPredicted RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 DLX2Q07687 328 aaPredicted RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 C11orf91Q3C1V1 193 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 ZNF776Q68DI1 518 aaPredicted RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 NAA40Q86UY6 237 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 FJX1Q86VR8 437 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 RDH10Q8IZV5 341 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 GCDHQ92947 438 aaPredicted RBP8.56□□□□□ -1.04
SMC2-201ENST00000286398 RADILQ96JH8 1075 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 DEFB126Q9BYW3 111 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 SLC7A7Q9UM01 511 aa8.56□□□□□ -1.04
SMC2-201ENST00000286398 NFKBIEO00221 500 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 SOCS6O14544 535 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 OMGP23515 440 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 IDUAP35475 653 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 ETV3P41162 512 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 HNRNPA3P51991 378 aaKnown RBP8.55□□□□□ -1.04
SMC2-201ENST00000286398 LETMD1Q6P1Q0 360 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 KANSL1Q7Z3B3 1105 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 SLC35F3Q8IY50 421 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 FRMD1Q8N878 549 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 ZBTB44Q8NCP5 570 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 OR6T1Q8NGN1 323 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 OR13F1Q8NGS4 319 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 NXF5Q9H1B4 397 aaKnown RBP8.55□□□□□ -1.04
SMC2-201ENST00000286398 EGLN3Q9H6Z9 239 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 GORASP2Q9H8Y8 452 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 EHFQ9NZC4 300 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 SIX4Q9UIU6 781 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 HHLA2Q9UM44 414 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 TCHHQ07283 1943 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 RNF212BA8MTL3 300 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 SLC31A2O15432 143 aa8.55□□□□□ -1.04
SMC2-201ENST00000286398 LCATP04180 440 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms