RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 ADAP00813 363 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 CD3EP07766 207 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 NID1P14543 1247 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 SERPINB5P36952 375 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 RPS26P62854 115 aaKnown RBP11.35□□□□□ -0.59
CD44-203ENST00000278386 VEZF1Q14119 521 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 STK11Q15831 433 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 PGS1Q32NB8 556 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 KLHL26Q53HC5 615 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 C6orf136Q5SQH8 315 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 PDZK1Q5T2W1 519 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 BHLHB9Q6PI77 547 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 GABRG1Q8N1C3 465 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 SLC43A2Q8N370 569 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 PSMA8Q8TAA3 256 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 TCP10LQ8TDR4 215 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 GPR119Q8TDV5 335 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 GTPBP3Q969Y2 492 aaKnown RBP11.35□□□□□ -0.59
CD44-203ENST00000278386 ARL8AQ96BM9 186 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 SLC35G5Q96KT7 338 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 MRGPRX4Q96LA9 322 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 OR5B2Q96R09 309 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 TMEM204Q9BSN7 226 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 DUSP26Q9BV47 211 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 HDHD5Q9BXW7 423 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 POTEKPQ9BYX7 375 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 BHLHE41Q9C0J9 482 aaPredicted RBP11.35□□□□□ -0.59
CD44-203ENST00000278386 ESRP2Q9H6T0 727 aaKnown RBP11.35□□□□□ -0.59
CD44-203ENST00000278386 ZNF701Q9NV72 531 aaPredicted RBP11.35□□□□□ -0.59
CD44-203ENST00000278386 KLHL9Q9P2J3 617 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 ZDHHC2Q9UIJ5 367 aa11.35□□□□□ -0.59
CD44-203ENST00000278386 RNF103-CHMP3A0A140T963 221 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 EFNA2O43921 213 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 SOX30O94993 753 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 YES1P07947 543 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 G6PDP11413 515 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 PAX1P15863 534 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 PRPS1L1P21108 318 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 MATN1P21941 496 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 HBA1P69905 142 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 MAD2L1Q13257 205 aaPredicted RBP11.34□□□□□ -0.59
CD44-203ENST00000278386 QPRTQ15274 297 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 GPR68Q15743 365 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 TAB1Q15750 504 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 SFRP5Q5T4F7 317 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 BHLHA15Q7RTS1 189 aaPredicted RBP11.34□□□□□ -0.59
CD44-203ENST00000278386 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.34□□□□□ -0.59
CD44-203ENST00000278386 OR5W2Q8NH69 310 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 IGFBPL1Q8WX77 278 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.34□□□□□ -0.59
CD44-203ENST00000278386 TRMT61AQ96FX7 289 aaKnown RBP11.34□□□□□ -0.59
CD44-203ENST00000278386 PPP1R36Q96LQ0 422 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 GP6Q9HCN6 339 aa11.34□□□□□ -0.59
CD44-203ENST00000278386 A0A1W2PP18 115 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 SERINC4A6NH21 518 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 NPIPB9F8W1W9 429 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 EIF4E2O60573 245 aaKnown RBP11.33□□□□□ -0.6
CD44-203ENST00000278386 LYZL6O75951 148 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 AK1P00568 194 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 NUDT17P0C025 328 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 UBTFL6P0CB48 400 aaPredicted RBP11.33□□□□□ -0.6
CD44-203ENST00000278386 ENPP1P22413 925 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 ARRB2P32121 409 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 CDKN1AP38936 164 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 RAC3P60763 192 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 BSPH1Q075Z2 132 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 RASGEF1BQ0VAM2 473 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 FAPQ12884 760 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 ITGADQ13349 1161 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 PDCD2Q16342 344 aaPredicted RBP11.33□□□□□ -0.6
CD44-203ENST00000278386 TIGD2Q4W5G0 525 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 NCMAPQ5T1S8 102 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 OR4F3Q6IEY1 312 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 ADAM5Q6NVV9 412 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 OLIG3Q7RTU3 272 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 C16orf62Q7Z3J2 963 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 PRIMA1Q86XR5 153 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 CLECL1Q8IZS7 167 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 KBTBD8Q8NFY9 601 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 OR4A15Q8NGL6 344 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 HSD17B8Q92506 261 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 NEUROG1Q92886 237 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 COQ8BQ96D53 544 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 SDF2Q99470 211 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 PSD2Q9BQI7 771 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 NMUR2Q9GZQ4 415 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 QRSL1Q9H0R6 528 aaKnown RBP11.33□□□□□ -0.6
CD44-203ENST00000278386 ALG2Q9H553 416 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 L2HGDHQ9H9P8 463 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 NOP53Q9NZM5 478 aaKnown RBP11.33□□□□□ -0.6
CD44-203ENST00000278386 LGALS13Q9UHV8 139 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 PRSS50Q9UI38 385 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 CSPG4Q6UVK1 2322 aa11.33□□□□□ -0.6
CD44-203ENST00000278386 ZANQ9Y493 2812 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 CADP27708 2225 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 DUXAA6NLW8 204 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 C9JVG2 144 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 STX11O75558 287 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 H6PDO95479 791 aa11.32□□□□□ -0.6
CD44-203ENST00000278386 CSTAP01040 98 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms