RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 PHOSPHO1Q8TCT1 267 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 NMD3Q96D46 503 aaKnown RBP20.24■□□□□ 0.83
CCDC7-201ENST00000277657 BPIFA2Q96DR5 249 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 VMP1Q96GC9 406 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 LPAR4Q99677 370 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 DPH1Q9BZG8 443 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 ULBP3Q9BZM4 244 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 ATP13A2Q9NQ11 1180 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 GPR83Q9NYM4 423 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 CNOT2Q9NZN8 540 aaKnown RBP20.24■□□□□ 0.83
CCDC7-201ENST00000277657 RPS6KB2Q9UBS0 482 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 C19orf25Q9UFG5 118 aaPredicted RBP20.24■□□□□ 0.83
CCDC7-201ENST00000277657 KIF26BQ2KJY2 2108 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 A0A1W2PQD3 144 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 UNC119BA6NIH7 251 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 OIP5O43482 229 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 ACVR2AP27037 513 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 MAP2K4P45985 399 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 FAM198BQ6UWH4 519 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 ZNF420Q8TAQ5 688 aaPredicted RBP20.24■□□□□ 0.83
CCDC7-201ENST00000277657 NUBPLQ8TB37 319 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 BRIX1Q8TDN6 353 aaKnown RBP20.24■□□□□ 0.83
CCDC7-201ENST00000277657 DNAJA4Q8WW22 397 aaPredicted RBP20.24■□□□□ 0.83
CCDC7-201ENST00000277657 ISOC1Q96CN7 298 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 PHOX2BQ99453 314 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 TSSK6Q9BXA6 273 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 ACOT13Q9NPJ3 140 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 AKAP7Q9P0M2 348 aaPredicted RBP20.24■□□□□ 0.83
CCDC7-201ENST00000277657 COMMD3-BMI1R4GMX3 469 aa20.24■□□□□ 0.83
CCDC7-201ENST00000277657 ZNF99A8MXY4 864 aaPredicted RBP20.23■□□□□ 0.83
CCDC7-201ENST00000277657 ZNF264O43296 627 aa20.23■□□□□ 0.83
CCDC7-201ENST00000277657 RFPL3O75679 317 aa20.23■□□□□ 0.83
CCDC7-201ENST00000277657 INMTO95050 263 aa20.23■□□□□ 0.83
CCDC7-201ENST00000277657 GP2P55259 537 aaKnown RBP20.23■□□□□ 0.83
CCDC7-201ENST00000277657 COPZ1P61923 177 aa20.23■□□□□ 0.83
CCDC7-201ENST00000277657 FAM199XQ6PEV8 388 aaPredicted RBP20.23■□□□□ 0.83
CCDC7-201ENST00000277657 LSRQ86X29 649 aaPredicted RBP20.23■□□□□ 0.83
CCDC7-201ENST00000277657 ALDH16A1Q8IZ83 802 aa20.23■□□□□ 0.83
CCDC7-201ENST00000277657 CDK20Q8IZL9 346 aa20.23■□□□□ 0.83
CCDC7-201ENST00000277657 OR8K3Q8NH51 312 aa20.23■□□□□ 0.83
CCDC7-201ENST00000277657 DOK1Q99704 481 aa20.23■□□□□ 0.83
CCDC7-201ENST00000277657 TBC1D23Q9NUY8 699 aa20.23■□□□□ 0.83
CCDC7-201ENST00000277657 GPN3Q9UHW5 284 aaPredicted RBP20.23■□□□□ 0.83
CCDC7-201ENST00000277657 WDFY3Q8IZQ1 3526 aa20.23■□□□□ 0.83
CCDC7-201ENST00000277657 EFCAB10A6NFE3 127 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 ALG1L2C9J202 215 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 KPNA4O00629 521 aaPredicted RBP20.22■□□□□ 0.83
CCDC7-201ENST00000277657 PIPP12273 146 aaPredicted RBP20.22■□□□□ 0.83
CCDC7-201ENST00000277657 C21orf33P30042 268 aaPredicted RBP20.22■□□□□ 0.83
CCDC7-201ENST00000277657 GPR107Q5VW38 600 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 CBLN3Q6UW01 205 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 SUMF1Q8NBK3 374 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 OR4Q3Q8NH05 313 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 MR1Q95460 341 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 TSC22D3Q99576 134 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 RTN4RQ9BZR6 473 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 LAT2Q9GZY6 243 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 LIN28AQ9H9Z2 209 aaKnown RBP20.22■□□□□ 0.83
CCDC7-201ENST00000277657 CARD8Q9Y2G2 431 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 ZNF318Q5VUA4 2279 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 CACNA1HO95180 2353 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 A0A087WUJ7 227 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 OR6C70A6NIJ9 312 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 GTPBP1O00178 669 aaKnown RBP20.22■□□□□ 0.83
CCDC7-201ENST00000277657 TLX2O43763 284 aaPredicted RBP20.22■□□□□ 0.83
CCDC7-201ENST00000277657 FADS2O95864 444 aaKnown RBP20.22■□□□□ 0.83
CCDC7-201ENST00000277657 FXYD6P3P58550 94 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 SLC26A5P58743 744 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 ST3GAL4Q11206 333 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 SNAPC1Q16533 368 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 CLEC12AQ5QGZ9 265 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 MEDAGQ5VYS4 303 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 B3GNT6Q6ZMB0 384 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 RORBQ92753 470 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 C3orf49Q96BT1 292 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 SLC38A2Q96QD8 506 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 CCNL2Q96S94 520 aaPredicted RBP20.22■□□□□ 0.83
CCDC7-201ENST00000277657 PRRG3Q9BZD7 231 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 PTTG2Q9NZH5 202 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 DNAJC27Q9NZQ0 273 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 SELENONQ9NZV5 590 aa20.22■□□□□ 0.83
CCDC7-201ENST00000277657 LOC102723996A0A087X1L8 192 aa20.21■□□□□ 0.83
CCDC7-201ENST00000277657 TMEM200CA6NKL6 621 aa20.21■□□□□ 0.83
CCDC7-201ENST00000277657 VGLL3A8MV65 326 aa20.21■□□□□ 0.83
CCDC7-201ENST00000277657 NRG3P56975 720 aa20.21■□□□□ 0.83
CCDC7-201ENST00000277657 TBCEQ15813 527 aaPredicted RBP20.21■□□□□ 0.83
CCDC7-201ENST00000277657 SYT14P1Q58G82 188 aa20.21■□□□□ 0.83
CCDC7-201ENST00000277657 SYT6Q5T7P8 510 aaPredicted RBP20.21■□□□□ 0.83
CCDC7-201ENST00000277657 WBP2NLQ6ICG8 309 aa20.21■□□□□ 0.83
CCDC7-201ENST00000277657 SLC30A6Q6NXT4 461 aa20.21■□□□□ 0.83
CCDC7-201ENST00000277657 TMEM163Q8TC26 289 aa20.21■□□□□ 0.83
CCDC7-201ENST00000277657 C8orf44Q96CB5 159 aa20.21■□□□□ 0.83
CCDC7-201ENST00000277657 EDEM2Q9BV94 578 aa20.21■□□□□ 0.83
CCDC7-201ENST00000277657 LOXL2Q9Y4K0 774 aa20.21■□□□□ 0.83
CCDC7-201ENST00000277657 DLL1O00548 723 aa20.2■□□□□ 0.82
CCDC7-201ENST00000277657 FADS1O60427 444 aa20.2■□□□□ 0.82
CCDC7-201ENST00000277657 STSP08842 583 aa20.2■□□□□ 0.82
CCDC7-201ENST00000277657 FUT1P19526 365 aa20.2■□□□□ 0.82
CCDC7-201ENST00000277657 RAB15P59190 212 aa20.2■□□□□ 0.82
CCDC7-201ENST00000277657 E2F1Q01094 437 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms