RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ART5Q96L15 291 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 OPALINQ96PE5 141 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 SH3GL3Q99963 347 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 MND1Q9BWT6 205 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 VN1R1Q9GZP7 353 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 RPS6KB2Q9UBS0 482 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 OSGIN1Q9UJX0 560 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 MRTO4Q9UKD2 239 aaKnown RBP8.82□□□□□ -1
TRIM55-201ENST00000276573 MKL2Q9ULH7 1088 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 SRPK3Q9UPE1 567 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 SLC35A3Q9Y2D2 325 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 ASXL3Q9C0F0 2248 aa8.82□□□□□ -1
TRIM55-201ENST00000276573 IGHV5-10-1A0A0J9YXX1 117 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 C2orf92A0A1B0GVN3 265 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 CCRL2O00421 344 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 BHLHE40O14503 412 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 SCG5P05408 212 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 TUBA1BP68363 451 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 SSX1Q16384 188 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 FNDC7Q5VTL7 733 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 RPL13AP3Q6NVV1 102 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 PAQR6Q6TCH4 344 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 TUBA1AQ71U36 451 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 ATCAYQ86WG3 371 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 CPOQ8IVL8 374 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 LNX2Q8N448 690 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 OR52L1Q8NGH7 329 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 OR13C2Q8NGS9 318 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 FANK1Q8TC84 345 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 TNFRSF13CQ96RJ3 184 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 TAPBPLQ9BX59 468 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 SLC7A5P2Q9GIP4 190 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 TGIF2Q9GZN2 237 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 DCSTAMPQ9H295 470 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 H2AFY2Q9P0M6 372 aaPredicted RBP8.81□□□□□ -1
TRIM55-201ENST00000276573 ICAM5Q9UMF0 924 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 CARD8Q9Y2G2 431 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 PMF1-BGLAPU3KQ54 211 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 RP1P56715 2156 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 A0A1B0GVG6 124 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 HCN1O60741 890 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 UTS2O95399 124 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 NGFRP08138 427 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 HBQ1P09105 142 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 SAGP10523 405 aaPredicted RBP8.81□□□□□ -1
TRIM55-201ENST00000276573 SERPINB10P48595 397 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 GPR143P51810 404 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 CDH11P55287 796 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 PRPF38BQ5VTL8 546 aaKnown RBP8.81□□□□□ -1
TRIM55-201ENST00000276573 NXNL2Q5VZ03 156 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 SMARCD3Q6STE5 483 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 APOOLQ6UXV4 268 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 THSD4Q6ZMP0 1018 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 USP43Q70EL4 1123 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 ZNF527Q8NB42 609 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 SLC38A9Q8NBW4 561 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 FAM71CQ8NEG0 241 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 OR1N1Q8NGS0 311 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 OR51A7Q8NH64 312 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 DNAJA4Q8WW22 397 aaPredicted RBP8.81□□□□□ -1
TRIM55-201ENST00000276573 NAT6Q93015 286 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 BORCS5Q969J3 196 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 RNF31Q96EP0 1072 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 OR6C1Q96RD1 312 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 HINT3Q9NQE9 182 aaKnown RBP8.81□□□□□ -1
TRIM55-201ENST00000276573 CHCHD3Q9NX63 227 aaKnown RBP8.81□□□□□ -1
TRIM55-201ENST00000276573 CTSFQ9UBX1 484 aa8.81□□□□□ -1
TRIM55-201ENST00000276573 EXOGQ9Y2C4 368 aaKnown RBP8.81□□□□□ -1
TRIM55-201ENST00000276573 CABIN1Q9Y6J0 2220 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 IGLV3-12A0A075B6K2 115 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 A0A087WUJ7 227 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 LOC100506127A0A0U1RQW1 187 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 PATE3B3GLJ2 98 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 GTPBP1O00178 669 aaKnown RBP8.8□□□□□ -1
TRIM55-201ENST00000276573 SCDO00767 359 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 MYL12BO14950 172 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 TO15178 435 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 OIP5O43482 229 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 REM1O75628 298 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 APOL3O95236 402 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 HPGDP15428 266 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 HTR1FP30939 366 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 LCN1P31025 176 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 OPRL1P41146 370 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 COPZ1P61923 177 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 FOXK2Q01167 660 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.8□□□□□ -1
TRIM55-201ENST00000276573 MLLT11Q13015 90 aaPredicted RBP8.8□□□□□ -1
TRIM55-201ENST00000276573 FHL1Q13642 323 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 C1DQ13901 141 aaKnown RBP8.8□□□□□ -1
TRIM55-201ENST00000276573 EBPQ15125 230 aaKnown RBP8.8□□□□□ -1
TRIM55-201ENST00000276573 CD226Q15762 336 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 TIMM50Q3ZCQ8 353 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 SOWAHCQ53LP3 525 aaPredicted RBP8.8□□□□□ -1
TRIM55-201ENST00000276573 SLC35F1Q5T1Q4 408 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 HLA-DQA1Q5Y7H0 255 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 RTL4Q6ZR62 310 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 CXXC5Q7LFL8 322 aaKnown RBP8.8□□□□□ -1
TRIM55-201ENST00000276573 ADCK1Q86TW2 530 aa8.8□□□□□ -1
TRIM55-201ENST00000276573 OAFQ86UD1 273 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms