RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 SOX30O94993 753 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 PAHP00439 452 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 TCRBP04435 133 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 PCCBP05166 539 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 KLK1P06870 262 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 ZP3P21754 424 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 ANXA11P50995 505 aaKnown RBP9.59□□□□□ -0.87
UPF3B-201ENST00000276201 GBX2P52951 348 aaPredicted RBP9.59□□□□□ -0.87
UPF3B-201ENST00000276201 CDH11P55287 796 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 TRA2BP62995 288 aaKnown RBP9.59□□□□□ -0.87
UPF3B-201ENST00000276201 DYRK1AQ13627 763 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 EXOSC2Q13868 293 aaKnown RBP9.59□□□□□ -0.87
UPF3B-201ENST00000276201 FZD2Q14332 565 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 GALEQ14376 348 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 LGALSLQ3ZCW2 172 aaPredicted RBP9.59□□□□□ -0.87
UPF3B-201ENST00000276201 SLC36A2Q495M3 483 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 CCSMST1Q4G0I0 132 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 SMARCD3Q6STE5 483 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 RBM45Q8IUH3 476 aaKnown RBP9.59□□□□□ -0.87
UPF3B-201ENST00000276201 NAXDQ8IW45 347 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 DEFB124Q8NES8 71 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 HAVCR2Q8TDQ0 301 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 TREX2Q9BQ50 279 aaPredicted RBP9.59□□□□□ -0.87
UPF3B-201ENST00000276201 TMEM121BQ9BXQ6 578 aaPredicted RBP9.59□□□□□ -0.87
UPF3B-201ENST00000276201 PITHD1Q9GZP4 211 aaPredicted RBP9.59□□□□□ -0.87
UPF3B-201ENST00000276201 MALT1Q9UDY8 824 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 MAB21L2Q9Y586 359 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 TEX13CA0A0J9YWL9 993 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 SPTY2D1-AS1A0A0U1RR47 76 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 HMGN1P05114 100 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 SERPIND1P05546 499 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 CSRP1P21291 193 aaKnown RBP9.59□□□□□ -0.87
UPF3B-201ENST00000276201 F8A1P23610 371 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 EPHA8P29322 1005 aaPredicted RBP9.59□□□□□ -0.87
UPF3B-201ENST00000276201 PPP2R1BP30154 601 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 MMP15P51511 669 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 RAB14P61106 215 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 PITPNAQ00169 270 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 PUDPQ08623 228 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 BCL2L15Q5TBC7 163 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 FAAH2Q6GMR7 532 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 LCTLQ6UWM7 567 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 TMEM64Q6YI46 380 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 DBX2Q6ZNG2 339 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 RTL4Q6ZR62 310 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 KANSL1Q7Z3B3 1105 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 DGLUCYQ7Z3D6 616 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 OR9A1PQ8NGU1 263 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 SFXN5Q8TD22 340 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 PHF21AQ96BD5 680 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 TM4SF18Q96CE8 201 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 NUS1Q96E22 293 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 DTD2Q96FN9 168 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 WBP1Q96G27 269 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 GPA33Q99795 319 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 GSX2Q9BZM3 304 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 OR51B5Q9H339 312 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 ZCCHC4Q9H5U6 513 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 SLAMF7Q9NQ25 335 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 DLL4Q9NR61 685 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 UCKL1Q9NWZ5 548 aa9.59□□□□□ -0.87
UPF3B-201ENST00000276201 ANKDD1BA6NHY2 528 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 OR6C65A6NJZ3 312 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 K7ESM1 405 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 GPR171O14626 319 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 SURF4O15260 269 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 KLF4O43474 513 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 PRAF2O60831 178 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 B4GALT2O60909 372 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 TMEM127O75204 238 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 TGFB1P01137 390 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 HOXD4P09016 255 aaPredicted RBP9.58□□□□□ -0.88
UPF3B-201ENST00000276201 TFPIP10646 304 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 ZNF250P15622 560 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 FPR3P25089 353 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 SOX18P35713 384 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 ARRB1P49407 418 aaPredicted RBP9.58□□□□□ -0.88
UPF3B-201ENST00000276201 PIN1Q13526 163 aaPredicted RBP9.58□□□□□ -0.88
UPF3B-201ENST00000276201 TRAM2Q15035 370 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 GSG1Q2KHT4 349 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 SLC22A10Q63ZE4 541 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 TNFAIP8L2Q6P589 184 aaPredicted RBP9.58□□□□□ -0.88
UPF3B-201ENST00000276201 Q6ZVL8 140 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 TECPR1Q7Z6L1 1165 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 KRT78Q8N1N4 520 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 FAM71CQ8NEG0 241 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 OR8D4Q8NGM9 314 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 SAP25Q8TEE9 199 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 RBPMSQ93062 196 aaKnown RBP9.58□□□□□ -0.88
UPF3B-201ENST00000276201 RBP7Q96R05 134 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 SECISBP2Q96T21 854 aaKnown RBP9.58□□□□□ -0.88
UPF3B-201ENST00000276201 ARHGDIGQ99819 225 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 PLA2G12AQ9BZM1 189 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 B3GNT4Q9C0J1 378 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 TMEM168Q9H0V1 697 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 PELI2Q9HAT8 420 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 IL20Q9NYY1 176 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 OR1A2Q9Y585 309 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 NPFFR2Q9Y5X5 522 aa9.58□□□□□ -0.88
UPF3B-201ENST00000276201 A0A0G2JPF8 293 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms