RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 FAM27E3Q08E93 113 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 COX20Q5RI15 118 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 EEF1A1P5Q5VTE0 462 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 PPP4R4Q6NUP7 873 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 EPGNQ6UW88 154 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 ESPNLQ6ZVH7 1005 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 LSRQ86X29 649 aaPredicted RBP12.92□□□□□ -0.34
HMGN3-201ENST00000275036 TMCO5AQ8N6Q1 288 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 GLB1L3Q8NCI6 653 aaPredicted RBP12.92□□□□□ -0.34
HMGN3-201ENST00000275036 OR5W2Q8NH69 310 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 OR2V1Q8NHB1 315 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 KLHL15Q96M94 604 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 C7orf26Q96N11 449 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 LAT2Q9GZY6 243 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 CXXC4Q9H2H0 198 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 PLEKHF2Q9H8W4 249 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 SDR39U1Q9NRG7 319 aaPredicted RBP12.92□□□□□ -0.34
HMGN3-201ENST00000275036 STOML1Q9UBI4 398 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 CLEC4AQ9UMR7 237 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 PLEKHA6Q9Y2H5 1048 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 WDR45Q9Y484 360 aa12.92□□□□□ -0.34
HMGN3-201ENST00000275036 GPC6Q9Y625 555 aaPredicted RBP12.92□□□□□ -0.34
HMGN3-201ENST00000275036 ETV2O00321 342 aaPredicted RBP12.91□□□□□ -0.34
HMGN3-201ENST00000275036 UBDO15205 165 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 SIAH2O43255 324 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 DIAPH2O60879 1101 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 H6PDO95479 791 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 AGR2O95994 175 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 HRGP04196 525 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 GUSBP08236 651 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 FCGR2AP12318 317 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 H2AFXP16104 143 aaPredicted RBP12.91□□□□□ -0.34
HMGN3-201ENST00000275036 ME2P23368 584 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 ADH6P28332 368 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 PGM1P36871 562 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 CCR4P51679 360 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 MVDP53602 400 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 CHRNEQ04844 493 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 FGFBP1Q14512 234 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 QPRTQ15274 297 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 POU4F3Q15319 338 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 SYPL1Q16563 259 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 GSTA3Q16772 222 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 SLC25A53Q5H9E4 307 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 ATAD3BQ5T9A4 648 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 HBMQ6B0K9 141 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 DNAJC14Q6Y2X3 702 aaPredicted RBP12.91□□□□□ -0.34
HMGN3-201ENST00000275036 ZNF621Q6ZSS3 439 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 C22orf34Q6ZV56 151 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 ZNF619Q8N2I2 560 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 ANKFN1Q8N957 763 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 FAM71CQ8NEG0 241 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 PNPT1Q8TCS8 783 aaKnown RBP12.91□□□□□ -0.34
HMGN3-201ENST00000275036 OSTF1Q92882 214 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 NINJ1Q92982 152 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 ZBTB18Q99592 522 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 THUMPD3Q9BV44 507 aaKnown RBP12.91□□□□□ -0.34
HMGN3-201ENST00000275036 SRXN1Q9BYN0 137 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 QRSL1Q9H0R6 528 aaKnown RBP12.91□□□□□ -0.34
HMGN3-201ENST00000275036 COQ10BQ9H8M1 238 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 ZIM2Q9NZV7 527 aa12.91□□□□□ -0.34
HMGN3-201ENST00000275036 ZFHX3Q15911 3703 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 MTORP42345 2549 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 SH3D21A4FU49 640 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 CLDN24A6NM45 220 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 ADAM11O75078 769 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 CYP7B1O75881 506 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 CSTAP01040 98 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 IL6P05231 212 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 CHRM4P08173 479 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 UBTFL6P0CB48 400 aaPredicted RBP12.9□□□□□ -0.34
HMGN3-201ENST00000275036 CD8BP10966 210 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 CBFBQ13951 182 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 MAPK11Q15759 364 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 TMEM176BQ3YBM2 270 aaPredicted RBP12.9□□□□□ -0.34
HMGN3-201ENST00000275036 GTDC1Q4AE62 458 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 GPAT3Q53EU6 434 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 PAMR1Q6UXH9 720 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 FAM214BQ7L5A3 538 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 TRIML2Q8N7C3 387 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 ZNF610Q8N9Z0 462 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 ATP6V1C2Q8NEY4 427 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 TOR1AIP2Q8NFQ8 470 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 LRRC8CQ8TDW0 803 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 ZFP90Q8TF47 636 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 ROBO4Q8WZ75 1007 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 VPS33AQ96AX1 596 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 MRGPRX4Q96LA9 322 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 DACH2Q96NX9 599 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 FOXC2Q99958 501 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 EBF4Q9BQW3 602 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 PRRG4Q9BZD6 226 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 SLC38A1Q9H2H9 487 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 POLE3Q9NRF9 147 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 PAQR5Q9NXK6 330 aaPredicted RBP12.9□□□□□ -0.34
HMGN3-201ENST00000275036 MCTS1Q9ULC4 181 aaKnown RBP12.9□□□□□ -0.34
HMGN3-201ENST00000275036 TESMINQ9Y4I5 508 aa12.9□□□□□ -0.34
HMGN3-201ENST00000275036 RFXANKO14593 260 aa12.89□□□□□ -0.35
HMGN3-201ENST00000275036 SS18L1O75177 396 aaPredicted RBP12.89□□□□□ -0.35
HMGN3-201ENST00000275036 SYNGR4O95473 234 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms