RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 AGAP14A8MT82 685 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 FAM72CH0Y354 149 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 FOXE1O00358 373 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 OR7A17O14581 309 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 TPPPO94811 219 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 JUNDP17535 347 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 PRKACBP22694 351 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 FAM72AQ5TYM5 149 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 HBMQ6B0K9 141 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 FAM72DQ6L9T8 149 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 FAM72BQ86X60 149 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF679Q8IYX0 411 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF454Q8N9F8 522 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 MYLIPQ8WY64 445 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 CCDC74BQ96LY2 380 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 TESQ9UGI8 421 aaKnown RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 GPR52Q9Y2T5 361 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 LOC102724200A0A096LPH7 203 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ARNTLO00327 626 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 MITFO75030 526 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 KNG1P01042 644 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 DCTP40126 519 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 PTPRCAPQ14761 206 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 C3orf38Q5JPI3 329 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 DPPA4Q7L190 304 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 C12orf45Q8N5I9 185 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 FAM160A2Q8N612 972 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 FRS2Q8WU20 508 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 IGSF8Q969P0 613 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF281Q9Y2X9 895 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 PCYT1BQ9Y5K3 369 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 LRIT2A6NDA9 550 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 RPS15P62841 145 aaKnown RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 RELAQ04206 551 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 DBPQ10586 325 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 FAM182AQ5T1J6 154 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 PM20D1Q6GTS8 502 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF322Q6U7Q0 402 aaPredicted RBP7.51□□□□□ -1.21
LIMD1-201ENST00000273317 LRP10Q7Z4F1 713 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 B3GNT8Q7Z7M8 397 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 IL21RQ9HBE5 538 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 INIPQ9NRY2 104 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 CUTCQ9NTM9 273 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 TOGARAM1Q9Y4F4 1720 aa7.51□□□□□ -1.21
LIMD1-201ENST00000273317 CBR1P16152 277 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF28P17035 718 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 IL4RP24394 825 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 HOXD12P35452 270 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 PLA2G7Q13093 441 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 EEF1A1P5Q5VTE0 462 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 ISCA2Q86U28 154 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 ADGRG5Q8IZF4 528 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 SCLYQ96I15 445 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 NMNAT2Q9BZQ4 307 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 NOX3Q9HBY0 568 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 PPP1R14DQ9NXH3 145 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 CNIH4Q9P003 139 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 ADAM29Q9UKF5 820 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 POLHQ9Y253 713 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 A0A0J9YY10 115 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 NUDT19A8MXV4 375 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 C17orf112F2Z3M2 114 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 IGHG1P01857 330 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 GIFP27352 417 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 ERVPABLB-1P60509 514 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 DCAF7P61962 342 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 TATDN3Q17R31 274 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 SLC22A25Q6T423 547 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 TECPR1Q7Z6L1 1165 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 NTMT1Q9BV86 223 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 CNTNAP3Q9BZ76 1288 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 POT1Q9NUX5 634 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF443Q9Y2A4 671 aaPredicted RBP7.5□□□□□ -1.21
LIMD1-201ENST00000273317 HPGDSO60760 199 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 RHOP08100 348 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF888P0CJ79 500 aaPredicted RBP7.5□□□□□ -1.21
LIMD1-201ENST00000273317 ELK1P19419 428 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 MSX1P28360 303 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF140P52738 457 aaPredicted RBP7.5□□□□□ -1.21
LIMD1-201ENST00000273317 FIGNL1Q6PIW4 674 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 MEPCEQ7L2J0 689 aaKnown RBP7.5□□□□□ -1.21
LIMD1-201ENST00000273317 TMPRSS7Q7RTY8 843 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 NACAE9PAV3 2078 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 A0A1W2PP55 124 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 A0A1W2PQU0 124 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF217O75362 1048 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 GPR32O75388 356 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 STC2O76061 302 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 CCL5P13501 91 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 DCP2Q8IU60 420 aaKnown RBP7.5□□□□□ -1.21
LIMD1-201ENST00000273317 SLC35F3Q8IY50 421 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 NANPQ8TBE9 248 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 DIO2Q92813 273 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 UHRF2Q96PU4 802 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 SORT1Q99523 831 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 SMG9Q9H0W8 520 aaKnown RBP7.5□□□□□ -1.21
LIMD1-201ENST00000273317 CHRDQ9H2X0 955 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 C1orf123Q9NWV4 160 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 GPR160Q9UJ42 338 aa7.5□□□□□ -1.21
LIMD1-201ENST00000273317 RIMS3Q9UJD0 308 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms