RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SMARCD3Q6STE5 483 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 GLDNQ6ZMI3 551 aaPredicted RBP8.16□□□□□ -1.1
VAPB-201ENST00000265619 MOB3CQ70IA8 216 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 SLC44A3Q8N4M1 653 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 TEX26Q8N6G2 289 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 CAMKVQ8NCB2 501 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 SNX33Q8WV41 574 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 APOBEC4Q8WW27 367 aaKnown RBP8.16□□□□□ -1.1
VAPB-201ENST00000265619 CPNE2Q96FN4 548 aaPredicted RBP8.16□□□□□ -1.1
VAPB-201ENST00000265619 FAIM2Q9BWQ8 316 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 IGFLR1Q9H665 355 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 PTGFRNQ9P2B2 879 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 IL20RAQ9UHF4 553 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 ZFP37Q9Y6Q3 630 aaPredicted RBP8.16□□□□□ -1.1
VAPB-201ENST00000265619 PLXND1Q9Y4D7 1925 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 VCANP13611 3396 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 MYO16Q9Y6X6 1858 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 FGF10O15520 208 aaPredicted RBP8.16□□□□□ -1.1
VAPB-201ENST00000265619 COCHO43405 550 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 VNN2O95498 520 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 TRBC1P01850 177 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 FGBP02675 491 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 HLA-DPB1P04440 258 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 FGF1P05230 155 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 RAC2P15153 192 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 SPI1P17947 270 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 CD22P20273 847 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 PTNP21246 168 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 MMP11P24347 488 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 MAPK9P45984 424 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 MTNR1AP48039 350 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 CSNK1DP48730 415 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 SGSHP51688 502 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 PNLIPRP2P54317 469 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 NTHL1P78549 312 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 MC1RQ01726 317 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 PLEKHN1Q494U1 663 aaPredicted RBP8.16□□□□□ -1.1
VAPB-201ENST00000265619 CLEC12AQ5QGZ9 265 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 C16orf54Q6UWD8 224 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 SERPINA13PQ6UXR4 307 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 APOOLQ6UXV4 268 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 ASPGQ86U10 573 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 CACUL1Q86Y37 369 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 THEM6Q8WUY1 208 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 GEMIN6Q8WXD5 167 aaKnown RBP8.16□□□□□ -1.1
VAPB-201ENST00000265619 TIMP4Q99727 224 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 TMPRSS13Q9BYE2 586 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 P2RY12Q9H244 342 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 CWH43Q9H720 699 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 ZFP57Q9NU63 452 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 KCND3Q9UK17 655 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 SCML2Q9UQR0 700 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 HIDE1A8MVS5 230 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 ARHGEF33A8MVX0 844 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 SLC2A10O95528 541 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 ADAP00813 363 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 NQO2P16083 231 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 PRPS1L1P21108 318 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 AHRP35869 848 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 GIPRP48546 466 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 RAE1P78406 368 aaKnown RBP8.16□□□□□ -1.1
VAPB-201ENST00000265619 IRF4Q15306 451 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 POM121L1PQ3SYA9 428 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 STX12Q86Y82 276 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 CPXM2Q8N436 756 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 MEIOBQ8N635 442 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 OR8J2Q8NGG1 315 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 KAT2AQ92830 837 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 FATE1Q969F0 183 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 RGMAQ96B86 450 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 ORAI1Q96D31 301 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 CMTM7Q96FZ5 175 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 ZYG11BQ9C0D3 744 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 NOX3Q9HBY0 568 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 FGF20Q9NP95 211 aaPredicted RBP8.16□□□□□ -1.1
VAPB-201ENST00000265619 KLHL1Q9NR64 748 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 ASF1BQ9NVP2 202 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 CBLCQ9ULV8 474 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 OARD1Q9Y530 152 aa8.16□□□□□ -1.1
VAPB-201ENST00000265619 CHD9Q3L8U1 2897 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 METTL21EPA6NDL7 271 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 GFYI3L273 518 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 LCMT2O60294 686 aaKnown RBP8.15□□□□□ -1.1
VAPB-201ENST00000265619 PCDH8O95206 1070 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 C6orf47O95873 294 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 TIMP1P01033 207 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 COX5BP10606 129 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 ATF1P18846 271 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 PSMB1P20618 241 aaKnown RBP8.15□□□□□ -1.1
VAPB-201ENST00000265619 RPL3P39023 403 aaKnown RBP8.15□□□□□ -1.1
VAPB-201ENST00000265619 MTNR1BP49286 362 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 NR0B1P51843 470 aaKnown RBP8.15□□□□□ -1.1
VAPB-201ENST00000265619 LUMP51884 338 aaPredicted RBP8.15□□□□□ -1.1
VAPB-201ENST00000265619 EPHB3P54753 998 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 BLOC1S1P78537 153 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 CDK6Q00534 326 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 NCMAPQ5T1S8 102 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 RPTNQ6XPR3 784 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 ANKRD33Q7Z3H0 272 aa8.15□□□□□ -1.1
VAPB-201ENST00000265619 OR2W3Q7Z3T1 314 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms