RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 ID2Q02363 134 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 ZNF85Q03923 595 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 TRAM1Q15629 374 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 RRM2BQ7LG56 351 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 SDR16C5Q8N3Y7 309 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 OR6C4Q8NGE1 309 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 OR9A4Q8NGU2 314 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 CNOT9Q92600 299 aaKnown RBP10.28□□□□□ -0.76
MSH3-201ENST00000265081 PGLYRP3Q96LB9 341 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 TM9SF2Q99805 663 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 NMNAT2Q9BZQ4 307 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 SLC19A3Q9BZV2 496 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 EXOSC3Q9NQT5 275 aaKnown RBP10.28□□□□□ -0.76
MSH3-201ENST00000265081 TNFRSF10DQ9UBN6 386 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 SIRT4Q9Y6E7 314 aaPredicted RBP10.28□□□□□ -0.76
MSH3-201ENST00000265081 A0A1B0GWA3 101 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 H0YIG0 161 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 SSX4O60224 188 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 HCN1O60741 890 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 THBS2P35442 1172 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 GAS6Q14393 721 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 KLHL26Q53HC5 615 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 SLC37A3Q8NCC5 494 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 HMGB4Q8WW32 186 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 SENP5Q96HI0 755 aaPredicted RBP10.28□□□□□ -0.76
MSH3-201ENST00000265081 EPHA6Q9UF33 1036 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 MED31Q9Y3C7 131 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 EXPH5Q8NEV8 1989 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 HYAL3O43820 417 aaPredicted RBP10.28□□□□□ -0.76
MSH3-201ENST00000265081 RNH1P13489 461 aaKnown RBP10.28□□□□□ -0.76
MSH3-201ENST00000265081 EPHA4P54764 986 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 HSD17B7P56937 341 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 POU4F2Q12837 409 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 PDZK1Q5T2W1 519 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 AGAP6Q5VW22 663 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 PRR23CQ6ZRP0 262 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 SHFQ7M4L6 423 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 NR2C2APQ86WQ0 139 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 SYT14Q8NB59 555 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 AGAP4Q96P64 663 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 TEAD3Q99594 435 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 KLHL25Q9H0H3 589 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 ISG20L2Q9H9L3 353 aaKnown RBP10.28□□□□□ -0.76
MSH3-201ENST00000265081 BABAM2Q9NXR7 383 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 GSTK1Q9Y2Q3 226 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 NOX1Q9Y5S8 564 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 A0A1W2PQL4 384 aaPredicted RBP10.28□□□□□ -0.76
MSH3-201ENST00000265081 PRAMEF2O60811 474 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 RGS9O75916 674 aaPredicted RBP10.28□□□□□ -0.76
MSH3-201ENST00000265081 IFI30P13284 250 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 FUT1P19526 365 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 FOXD4Q12950 439 aaPredicted RBP10.28□□□□□ -0.76
MSH3-201ENST00000265081 BCL2A1Q16548 175 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 BMP8AQ7Z5Y6 402 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 ACBD7Q8N6N7 88 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 TMEM99Q8N816 258 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 OR7G1Q8NGA0 311 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 OR52L1Q8NGH7 329 aa10.28□□□□□ -0.76
MSH3-201ENST00000265081 SECISBP2Q96T21 854 aaKnown RBP10.28□□□□□ -0.76
MSH3-201ENST00000265081 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.28□□□□□ -0.76
MSH3-201ENST00000265081 PDE4DIPQ5VU43 2346 aa10.27□□□□□ -0.76
MSH3-201ENST00000265081 IGKV3D-11A0A0A0MRZ8 115 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 A0A0G2JK05 382 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 DYRK3O43781 588 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 SEPHS1P49903 392 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 DDI2Q5TDH0 399 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 DMKNQ6E0U4 476 aaPredicted RBP10.27□□□□□ -0.77
MSH3-201ENST00000265081 FIGNL1Q6PIW4 674 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 Q6ZS52 159 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 OR13C2Q8NGS9 318 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 C1orf216Q8TAB5 229 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 ACOT12Q8WYK0 555 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 ITFG2Q969R8 447 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 G6PC3Q9BUM1 346 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 HOXD1Q9GZZ0 328 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 LANCL2Q9NS86 450 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 ST6GALNAC2Q9UJ37 374 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 A0A087WUJ7 227 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 NPIPA5A0A0B4J1W7 369 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 NPIPA7E9PJI5 369 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 GTPBP1O00178 669 aaKnown RBP10.27□□□□□ -0.77
MSH3-201ENST00000265081 NPIPA8P0DM63 369 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 PEPDP12955 493 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 HTR3AP46098 478 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 EVX1P49640 407 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 SLC35F1Q5T1Q4 408 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 PLBD1Q6P4A8 553 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 ZNF550Q7Z398 422 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 TAF8Q7Z7C8 310 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 LHFPL3Q86UP9 236 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 PELOQ9BRX2 385 aaKnown RBP10.27□□□□□ -0.77
MSH3-201ENST00000265081 ALG8Q9BVK2 526 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 C2orf42Q9NWW7 574 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 CYP8B1Q9UNU6 501 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 CLCA2Q9UQC9 943 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 HRKO00198 91 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 ZNF217O75362 1048 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 CH25HO95992 272 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 SRFP11831 508 aa10.27□□□□□ -0.77
MSH3-201ENST00000265081 LCN1P31025 176 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms