RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 CCINQ13939 588 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 ABRAXAS2Q15018 415 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 KCTD9Q7L273 389 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 ZNF546Q86UE3 836 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 SLAMF9Q96A28 289 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 TMEM68Q96MH6 324 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 FEVQ99581 238 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 TAC3Q9UHF0 121 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 NDRG2Q9UN36 371 aaKnown RBP5.38□□□□□ -1.55
VCAN-201ENST00000265077 TOX4O94842 621 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 SPP1P10451 314 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 AGTR2P50052 363 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 CCR9P51686 369 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 CRISP1P54107 249 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 SYT14Q8NB59 555 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 OR10Q1Q8NGQ4 319 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 OR13C2Q8NGS9 318 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 RBP7Q96R05 134 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 MCHR1Q99705 422 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 PIGQQ9BRB3 760 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 ZNF385DQ9H6B1 395 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 A0A0A6YYJ9 748 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 LGI1O95970 557 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 PTTG1IPP53801 180 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 PCBP2Q15366 365 aaKnown RBP eCLIP5.38□□□□□ -1.559e-7■■■□□ 15.9
VCAN-201ENST00000265077 SAPCD1Q5SSQ6 148 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 HFE2Q6ZVN8 426 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 PXKQ7Z7A4 578 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 GSN-AS1Q9NRJ2 163 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 BABAM2Q9NXR7 383 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 VNN3Q9NY84 501 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 SLC45A1Q9Y2W3 748 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 TMEM210A6NLX4 147 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 CSF1P09603 554 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 SFTPCP11686 197 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 ACP5P13686 325 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 ANXA7P20073 488 aaKnown RBP5.38□□□□□ -1.55
VCAN-201ENST00000265077 GGT5P36269 586 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 ZNF41P51814 821 aaPredicted RBP5.38□□□□□ -1.55
VCAN-201ENST00000265077 SPCS3P61009 180 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 NKX3-2P78367 333 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 SP2Q02086 613 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 TEX30Q5JUR7 227 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 VITQ6UXI7 678 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 TTLL10Q6ZVT0 673 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 CLDN19Q8N6F1 224 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 MICU1Q9BPX6 476 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 KATNBL1Q9H079 304 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 GHRLQ9UBU3 117 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 SIX4Q9UIU6 781 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 PCTPQ9UKL6 214 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 MRPS17Q9Y2R5 130 aaKnown RBP5.38□□□□□ -1.55
VCAN-201ENST00000265077 FREM1Q5H8C1 2179 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 LRRK1Q38SD2 2015 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 A0A0A6YYH2 397 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 OR2A25A4D2G3 310 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 A6NJ64 397 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 NRP1O14786 923 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 TSPAN12O95859 305 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 RPLP1P05386 114 aaKnown RBP5.38□□□□□ -1.55
VCAN-201ENST00000265077 MTNR1AP48039 350 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 IQCJQ1A5X6 159 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 ZMAT1Q5H9K5 638 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 ENPP7Q6UWV6 458 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 KANSL1Q7Z3B3 1105 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 GAS2L1Q99501 681 aaPredicted RBP5.38□□□□□ -1.55
VCAN-201ENST00000265077 SMOQ99835 787 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 DPEP2Q9H4A9 486 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 CENPMQ9NSP4 180 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 DMRT1Q9Y5R6 373 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 LINC00587B1AMM8 73 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 OR2C1O95371 312 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 RBMXP38159 391 aaKnown RBP5.38□□□□□ -1.55
VCAN-201ENST00000265077 CLCNKAP51800 687 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 CYCSP99999 105 aaKnown RBP5.38□□□□□ -1.55
VCAN-201ENST00000265077 IFITM2Q01629 132 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 GTDC1Q4AE62 458 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 CES4AQ5XG92 561 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 NADSYN1Q6IA69 706 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 CHADLQ6NUI6 762 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 LRFN4Q6PJG9 635 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 HSD17B13Q7Z5P4 300 aaPredicted RBP5.38□□□□□ -1.55
VCAN-201ENST00000265077 FRS2Q8WU20 508 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 OR11A1Q9GZK7 315 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 TMEM235A6NFC5 223 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 ACOD1A6NK06 481 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 RNF13O43567 381 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 POP7O75817 140 aaKnown RBP5.38□□□□□ -1.55
VCAN-201ENST00000265077 TAS2R31P59538 309 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 NOGQ13253 232 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 MICAQ29983 383 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 ARSIQ5FYB1 569 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 PLPP4Q5VZY2 271 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 ARHGAP12Q8IWW6 846 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 OR4K14Q8NGD5 310 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 SLC7A13Q8TCU3 470 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 ALG8Q9BVK2 526 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 ACKR4Q9NPB9 350 aa5.38□□□□□ -1.55
VCAN-201ENST00000265077 ZNF275Q9NSD4 429 aaPredicted RBP5.38□□□□□ -1.55
VCAN-201ENST00000265077 GPATCH2Q9NW75 528 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms