RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 RAD21L1Q9H4I0 556 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 A4GALTQ9NPC4 353 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 CCDC168Q8NDH2 2452 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 IGLV3-32A0A0A0MS00 114 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 OR14I1A6ND48 311 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 FAM90A27PA6NNH2 459 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 BCKDKO14874 412 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 DBIP07108 87 aaKnown RBP6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 BMP2P12643 396 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 NID1P14543 1247 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 PRKCAP17252 672 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 RPS4Y1P22090 263 aaKnown RBP6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 PPIBP23284 216 aaKnown RBP6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 GCKP35557 465 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 EIF1AXP47813 144 aaKnown RBP6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 NUP107P57740 925 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 IRX1P78414 480 aaPredicted RBP6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 DMTNQ08495 405 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 MERTKQ12866 999 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 GANABQ14697 944 aaKnown RBP6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 ACSF3Q4G176 576 aaPredicted RBP6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 LRRC23Q53EV4 343 aaPredicted RBP6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 REEP3Q6NUK4 255 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 AAGABQ6PD74 315 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 ENPP6Q6UWR7 440 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 MRGPRGQ86SM5 289 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 MISPQ8IVT2 679 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 CADM2Q8N3J6 435 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 FITM2Q8N6M3 262 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 C11orf65Q8NCR3 313 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 NAXEQ8NCW5 288 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 FAM156AQ8NDB6 213 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 TOR1AIP2Q8NFQ8 470 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 BCAS4Q8TDM0 211 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 GPR119Q8TDV5 335 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 TSPEARQ8WU66 669 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 PIGQQ9BRB3 760 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 PINK1Q9BXM7 581 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 TMEM45AQ9NWC5 275 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 CORO2BQ9UQ03 480 aa6.54□□□□□ -1.36
DEPDC1B-201ENST00000265036 TEX15Q9BXT5 2789 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 A0A1W2PNR3 127 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 CDHR4A6H8M9 788 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 CLCA1A8K7I4 914 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 FAM47E-STBD1D6RA91 191 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 NME4O00746 187 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 TNFSF11O14788 317 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 EFNA2O43921 213 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 SOX30O94993 753 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 PABPC4LP0CB38 370 aaKnown RBP6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 ZNF708P17019 499 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 TNFRSF1BP20333 461 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 ME2P23368 584 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 LCN1P31025 176 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 IDH2P48735 452 aaKnown RBP6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 SESN3P58005 492 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 ART3Q13508 389 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 CBFBQ13951 182 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 LIN52Q52LA3 116 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 C1orf185Q5T7R7 199 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 SEM1Q6ZVN7 128 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 MTERF4Q7Z6M4 381 aaKnown RBP6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 LILRA2Q8N149 483 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 GTPBP8Q8N3Z3 284 aaPredicted RBP6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 FAM71CQ8NEG0 241 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 OR5W2Q8NH69 310 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 FNDC9Q8TBE3 224 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 OR11A1Q9GZK7 315 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 PRDM14Q9GZV8 571 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 MTHFD2LQ9H903 347 aaPredicted RBP6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 CACYBPQ9HB71 228 aaKnown RBP6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 POLE3Q9NRF9 147 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 RYDENQ9NUL5 291 aaKnown RBP6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 CMTM6Q9NX76 183 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 CALML5Q9NZT1 146 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 SUCOQ9UBS9 1254 aaKnown RBP6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 ANGPT4Q9Y264 503 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 SLC35A3Q9Y2D2 325 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 FBN2P35556 2912 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 IGHV3-15A0A0B4J1V0 119 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 A0A0G2JPF8 293 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 A0A1B0GUH1 482 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 HNRNPCL2B2RXH8 293 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 HNRNPCL3B7ZW38 293 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 M0R3H8 397 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 HNRNPCL1O60812 293 aaKnown RBP6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 TOXO94900 526 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 EPPINO95925 133 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 TGM6O95932 706 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 HNRNPCL4P0DMR1 293 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 TCN1P20061 433 aaPredicted RBP6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 KLK2P20151 261 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 BMP5P22003 454 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 PSMA4P25789 261 aaKnown RBP6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 MSX2P35548 267 aaPredicted RBP6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 EEF1A1P68104 462 aaKnown RBP6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 MXRA7P84157 204 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 SLC25A3Q00325 362 aa6.53□□□□□ -1.36
DEPDC1B-201ENST00000265036 LARS2Q15031 903 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms