RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 MAT1AQ00266 395 aaKnown RBP12.21□□□□□ -0.45
NUP54-201ENST00000264883 ESPNLQ6ZVH7 1005 aa12.21□□□□□ -0.45
NUP54-201ENST00000264883 TMPRSS11BQ86T26 416 aa12.21□□□□□ -0.45
NUP54-201ENST00000264883 HS6ST3Q8IZP7 471 aa12.21□□□□□ -0.45
NUP54-201ENST00000264883 ZFP82Q8N141 532 aa12.21□□□□□ -0.45
NUP54-201ENST00000264883 SVBPQ8N300 66 aa12.21□□□□□ -0.45
NUP54-201ENST00000264883 ZNF707Q96C28 371 aaPredicted RBP12.21□□□□□ -0.45
NUP54-201ENST00000264883 RSPO3Q9BXY4 272 aaPredicted RBP12.21□□□□□ -0.45
NUP54-201ENST00000264883 NOX3Q9HBY0 568 aa12.21□□□□□ -0.45
NUP54-201ENST00000264883 MBD1Q9UIS9 605 aaPredicted RBP12.21□□□□□ -0.45
NUP54-201ENST00000264883 CAMK2AQ9UQM7 478 aa12.21□□□□□ -0.45
NUP54-201ENST00000264883 SIRT4Q9Y6E7 314 aaPredicted RBP12.21□□□□□ -0.45
NUP54-201ENST00000264883 LAMA2P24043 3122 aaKnown RBP12.21□□□□□ -0.46
NUP54-201ENST00000264883 SLC5A10A0PJK1 596 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 RAB19A4D1S5 217 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 SULT1C2O00338 296 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 SLC16A8O95907 504 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 IGHA1P01876 353 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 GJA1P17302 382 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 SSTP61278 116 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 LSM11P83369 360 aaKnown RBP eCLIP12.21□□□□□ -0.46
NUP54-201ENST00000264883 CNTN1Q12860 1018 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 TMEM44Q2T9K0 475 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 AVPI1Q5T686 147 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 ZNF626Q68DY1 528 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 ADNP2Q6IQ32 1131 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 MAMSTRQ6ZN01 415 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 SERPINA12Q8IW75 414 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 DMBX1Q8NFW5 382 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 OR6K3Q8NGY3 331 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 SMIM4Q8WVI0 70 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 OR5P2Q8WZ92 322 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 NEIL2Q969S2 332 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 VOPP1Q96AW1 172 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 ORAI1Q96D31 301 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 WFDC6Q9BQY6 131 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 NEUROD4Q9HD90 331 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 MIEF1Q9NQG6 463 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 CTPS2Q9NRF8 586 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 AHSPQ9NZD4 102 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 A4GNTQ9UNA3 340 aa12.21□□□□□ -0.46
NUP54-201ENST00000264883 EXOGQ9Y2C4 368 aaKnown RBP12.21□□□□□ -0.46
NUP54-201ENST00000264883 ANAPC1Q9H1A4 1944 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 A0A1W2PRQ8 180 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 S100A8P05109 93 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 LAG3P18627 525 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 FNTBP49356 437 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 TAS2R50P59544 299 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 MC1RQ01726 317 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 FZD5Q13467 585 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 SLBPQ14493 270 aaKnown RBP eCLIP12.2□□□□□ -0.46
NUP54-201ENST00000264883 ENTPD8Q5MY95 495 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 PRAMEF13Q5VWM6 474 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 CDC73Q6P1J9 531 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 C1orf94Q6P1W5 598 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 BAIAP2L2Q6UXY1 529 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 DBX2Q6ZNG2 339 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 RFLNAQ6ZTI6 216 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 MEX3DQ86XN8 651 aaKnown RBP12.2□□□□□ -0.46
NUP54-201ENST00000264883 LRRC56Q8IYG6 542 aaPredicted RBP12.2□□□□□ -0.46
NUP54-201ENST00000264883 OR14A16Q8NHC5 309 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 SLC38A5Q8WUX1 472 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 GINS4Q9BRT9 223 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 FNDC11Q9BVV2 318 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 BARX1Q9HBU1 254 aaPredicted RBP12.2□□□□□ -0.46
NUP54-201ENST00000264883 TAS2R5Q9NYW4 299 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 OPN4Q9UHM6 478 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 SLC25A13Q9UJS0 675 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 CKAP5Q14008 2032 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 OR6C68A6NDL8 312 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 NAP1L6A6NFF2 107 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 NPC1O15118 1278 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 CTDSPLO15194 276 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 UBXN7O94888 489 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 CRYBA1P05813 215 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 LINC00271P0C7V0 271 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 ACP5P13686 325 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 SNRPBP14678 240 aaKnown RBP12.2□□□□□ -0.46
NUP54-201ENST00000264883 ANXA7P20073 488 aaKnown RBP12.2□□□□□ -0.46
NUP54-201ENST00000264883 PRLHRP49683 370 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 NR0B1P51843 470 aaKnown RBP12.2□□□□□ -0.46
NUP54-201ENST00000264883 BDH1Q02338 343 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 ELFN2Q5R3F8 820 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 DHRS7BQ6IAN0 325 aaPredicted RBP12.2□□□□□ -0.46
NUP54-201ENST00000264883 CEACAM19Q7Z692 300 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 JAZF1Q86VZ6 243 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 IZUMO1Q8IYV9 350 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 SPAG16Q8N0X2 631 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 TMEM185AQ8NFB2 350 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 HMGB4Q8WW32 186 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 TMEM169Q96HH4 297 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 RASL12Q9NYN1 266 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 PLEKHM1Q9Y4G2 1056 aa12.2□□□□□ -0.46
NUP54-201ENST00000264883 TRBV23-1A0A0A0MS06 115 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 TMEM82A0PJX8 343 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 SNRPGP15A8MWD9 76 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 HYAL3O43820 417 aaPredicted RBP12.19□□□□□ -0.46
NUP54-201ENST00000264883 SYN1P17600 705 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 S100PP25815 95 aa12.19□□□□□ -0.46
NUP54-201ENST00000264883 MPGP29372 298 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms