RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 IL21RQ9HBE5 538 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 PHPT1Q9NRX4 125 aaPredicted RBP8.47□□□□□ -1.05
MSH4-201ENST00000263187 CLDND1Q9NY35 253 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 ACSL5Q9ULC5 683 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 FLVCR2Q9UPI3 526 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 PCDHGB7Q9Y5F8 929 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 KIAA1549LQ6ZVL6 1849 aa8.47□□□□□ -1.05
MSH4-201ENST00000263187 CXorf51AA0A1B0GTR3 108 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 A0A1B0GVT2 93 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 TBX19O60806 448 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 CTSVO60911 334 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 SOX30O94993 753 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 FAM157BP0CG42 384 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 HLA-DMAP28067 261 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 GABRA3P34903 492 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 GJA4P35212 333 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 FOXK2Q01167 660 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 POU4F3Q15319 338 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 ZIC1Q15915 447 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 ACSM3Q53FZ2 586 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 MRM1Q6IN84 353 aaKnown RBP8.46□□□□□ -1.05
MSH4-201ENST00000263187 MEPCEQ7L2J0 689 aaKnown RBP8.46□□□□□ -1.05
MSH4-201ENST00000263187 NRROSQ86YC3 692 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 NATD1Q8N6N6 113 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 LRRC17Q8N6Y2 441 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 COX18Q8N8Q8 333 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 OR11H4Q8NGC9 324 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 OR4N2Q8NGD1 307 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 ABHD4Q8TB40 342 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 TMEM239Q8WW34 195 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 SDF2Q99470 211 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 TEAD3Q99594 435 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 NKX3-1Q99801 234 aaPredicted RBP8.46□□□□□ -1.05
MSH4-201ENST00000263187 ADAM29Q9UKF5 820 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 ARHGEF17Q96PE2 2063 aaPredicted RBP8.46□□□□□ -1.05
MSH4-201ENST00000263187 SEC16AO15027 2179 aa8.46□□□□□ -1.05
MSH4-201ENST00000263187 TNFRSF10AO00220 468 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 FZD7O75084 574 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 OR5F1O95221 314 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 CTSBP07858 339 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 ADRB1P08588 477 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 ANKRD34CP0C6C1 535 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 HOXD11P31277 338 aaPredicted RBP8.46□□□□□ -1.06
MSH4-201ENST00000263187 HSD17B2P37059 387 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 PPM1FP49593 454 aaPredicted RBP8.46□□□□□ -1.06
MSH4-201ENST00000263187 ZNF136P52737 540 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 MLC1Q15049 377 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 PDGFRLQ15198 375 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 DECR1Q16698 335 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 DUSP6Q16828 381 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 DEFB110Q30KQ9 67 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 TMEM35AQ53FP2 167 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 SIAH3Q8IW03 269 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 LINC00471Q8N535 108 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 OR11H7Q8NGC8 314 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 ZNF431Q8TF32 576 aaPredicted RBP8.46□□□□□ -1.06
MSH4-201ENST00000263187 BPIFA2Q96DR5 249 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 HS6ST2Q96MM7 605 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 SOSTQ9BQB4 213 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 PRSS27Q9BQR3 290 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 MARVELD1Q9BSK0 173 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 PLA2G2FQ9BZM2 168 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 AUNIPQ9H7T9 357 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 MRPS18AQ9NVS2 196 aaKnown RBP8.46□□□□□ -1.06
MSH4-201ENST00000263187 ADAM18Q9Y3Q7 739 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 CIB4A0PJX0 185 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 TEX46H3BTG2 121 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 ADAM11O75078 769 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 EN2P19622 333 aaPredicted RBP8.46□□□□□ -1.06
MSH4-201ENST00000263187 CMPK1P30085 196 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 PITPNBP48739 271 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 ERVK-21P61565 698 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 FGFBP1Q14512 234 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 HES5Q5TA89 166 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 ZNF655Q8N720 491 aaPredicted RBP8.46□□□□□ -1.06
MSH4-201ENST00000263187 IL17RCQ8NAC3 791 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 FAM98AQ8NCA5 519 aaKnown RBP8.46□□□□□ -1.06
MSH4-201ENST00000263187 OR4K14Q8NGD5 310 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 OR52E2Q8NGJ4 325 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 OR2L8Q8NGY9 312 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 ZNF671Q8TAW3 534 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 SMPDL3BQ92485 455 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 CNOT9Q92600 299 aaKnown RBP8.46□□□□□ -1.06
MSH4-201ENST00000263187 CCDC120Q96HB5 630 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 ASB16Q96NS5 453 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 DPCDQ9BVM2 203 aaPredicted RBP8.46□□□□□ -1.06
MSH4-201ENST00000263187 TEX101Q9BY14 249 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 SRMSQ9H3Y6 488 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 MTHFD2LQ9H903 347 aaPredicted RBP8.46□□□□□ -1.06
MSH4-201ENST00000263187 FKRPQ9H9S5 495 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 TRIM36Q9NQ86 728 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 ZMIZ1Q9ULJ6 1067 aa8.46□□□□□ -1.06
MSH4-201ENST00000263187 IRGMA1A4Y4 181 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 SSNA1O43805 119 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 RASGRP1O95267 797 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 C1QBP02746 253 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 ACSL1P33121 698 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 ACTR1BP42025 376 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 OR3A3P47888 321 aa8.45□□□□□ -1.06
MSH4-201ENST00000263187 VSX2P58304 361 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms