RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 LIPCP11150 499 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 CSNK1G2P78368 415 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 C19orf57Q0VDD7 668 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 TSPAN31Q12999 210 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 SNTB2Q13425 540 aaKnown RBP12.06□□□□□ -0.48
SNX1-201ENST00000261889 ZNF767PQ75MW2 155 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 RASGRP3Q8IV61 690 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 SLC39A11Q8N1S5 342 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 OR2T33Q8NG76 320 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 OR7G2Q8NG99 324 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 ADAMTS15Q8TE58 950 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 PTP4A1Q93096 173 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 COQ10AQ96MF6 247 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 TRAF4Q9BUZ4 470 aaPredicted RBP12.06□□□□□ -0.48
SNX1-201ENST00000261889 CLEC4MQ9H2X3 399 aaPredicted RBP12.06□□□□□ -0.48
SNX1-201ENST00000261889 POT1Q9NUX5 634 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 KCMF1Q9P0J7 381 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 NDOR1Q9UHB4 597 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 ACAD8Q9UKU7 415 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 ADAM18Q9Y3Q7 739 aa12.06□□□□□ -0.48
SNX1-201ENST00000261889 CPMP14384 443 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 EXOSC7Q15024 291 aaKnown RBP12.05□□□□□ -0.48
SNX1-201ENST00000261889 TRAM2Q15035 370 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 AANATQ16613 207 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 DEFB134Q4QY38 66 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 ZNF620Q6ZNG0 422 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 ZAR1Q86SH2 424 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 ABHD4Q8TB40 342 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 MNTQ99583 582 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 C1QTNF7Q9BXJ2 289 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 DPAGT1Q9H3H5 408 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 FGF20Q9NP95 211 aaPredicted RBP12.05□□□□□ -0.48
SNX1-201ENST00000261889 MRPL39Q9NYK5 338 aaKnown RBP12.05□□□□□ -0.48
SNX1-201ENST00000261889 ENTPD4Q9Y227 616 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 ARPC5O15511 151 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 KDM4BO94953 1096 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 H2AFB2P0C5Z0 115 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 PKLRP30613 574 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 RPL3P39023 403 aaKnown RBP12.05□□□□□ -0.48
SNX1-201ENST00000261889 FNTBP49356 437 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 BLVRAP53004 296 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 ERVFC1P60507 584 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 ST8SIA6P61647 398 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 PRPF38BQ5VTL8 546 aaKnown RBP12.05□□□□□ -0.48
SNX1-201ENST00000261889 OR5M10Q6IEU7 315 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 FAM219AQ8IW50 185 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 STPG2Q8N412 459 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 RELL2Q8NC24 303 aaPredicted RBP12.05□□□□□ -0.48
SNX1-201ENST00000261889 OR6K6Q8NGW6 343 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 GNPDA2Q8TDQ7 276 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 YIPF5Q969M3 257 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 CREB3L1Q96BA8 519 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 OR1F2PQ96R84 312 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 BTBD1Q9H0C5 482 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 STARD5Q9NSY2 213 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 A0A1W2PPV9 198 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 LRIT2A6NDA9 550 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 HOXA2O43364 376 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 CDC123O75794 336 aaPredicted RBP12.05□□□□□ -0.48
SNX1-201ENST00000261889 TSPAN9O75954 239 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 PLATP00750 562 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 NDUFV2P19404 249 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 FGF9P31371 208 aaPredicted RBP12.05□□□□□ -0.48
SNX1-201ENST00000261889 MPIP34949 423 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 KHKP50053 298 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 SMIM11AP58511 58 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 SLC9A5Q14940 896 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 ZNF613Q6PF04 617 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 DPPA4Q7L190 304 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 NDUFAF7Q7L592 441 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 PRSS41Q7RTY9 318 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 SFTPA2Q8IWL1 248 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 OR4E2Q8NGC2 313 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 PHOSPHO2Q8TCD6 241 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 TIFAQ96CG3 184 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 TSSK2Q96PF2 358 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 INSM2Q96T92 566 aaPredicted RBP12.05□□□□□ -0.48
SNX1-201ENST00000261889 TSPAN10Q9H1Z9 355 aaPredicted RBP12.05□□□□□ -0.48
SNX1-201ENST00000261889 PIGUQ9H490 435 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 CYSLTR2Q9NS75 346 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 GNG8Q9UK08 70 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 ELF5Q9UKW6 265 aaPredicted RBP12.05□□□□□ -0.48
SNX1-201ENST00000261889 INSL6Q9Y581 213 aa12.05□□□□□ -0.48
SNX1-201ENST00000261889 ARRDC5A6NEK1 342 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 A8MVJ9 347 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 KDM4EB2RXH2 506 aaPredicted RBP12.04□□□□□ -0.48
SNX1-201ENST00000261889 M0R233 179 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 SLC35G4P0C7Q5 338 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 DCTDP32321 178 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 MLF2Q15773 248 aaPredicted RBP12.04□□□□□ -0.48
SNX1-201ENST00000261889 NLRC3Q7RTR2 1065 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 SERGEFQ9UGK8 458 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 ING1Q9UK53 422 aaPredicted RBP12.04□□□□□ -0.48
SNX1-201ENST00000261889 RPS10-NUDT3A0A1W2PQS6 291 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 LRRC72A6NJI9 287 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 MAN2B1O00754 1011 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 HTR2AP28223 471 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 GDNFP39905 211 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 PUDPQ08623 228 aa12.04□□□□□ -0.48
SNX1-201ENST00000261889 ST3GAL3Q11203 375 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms